RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 B4E1Z4 1266 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 SETSIPP0DME0 302 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 STMN1P16949 149 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 SAT1P21673 171 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 STRN3Q13033 797 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 RILPL1Q5EBL4 403 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 CCDC141Q6ZP82 1450 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
COL11A1-202ENST00000358392 SLF1Q9BQI6 1058 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 RRAGDQ9NQL2 400 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-202ENST00000358392 MAP2K2P36507 400 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 INPP1P49441 399 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 DCLK2Q8N568 766 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 ANO3Q9BYT9 981 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
COL11A1-202ENST00000358392 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 ARHGAP44Q17R89 818 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 ANKRD20A3Q5VUR7 823 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 SPDL1Q96EA4 605 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 ADAT2Q7Z6V5 191 aaKnown RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 ARHGAP25P42331 645 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 CASP2P42575 452 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 CCDC13Q8IYE1 715 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 BLZF1Q9H2G9 400 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 PLCB1Q9NQ66 1216 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 TTF2Q9UNY4 1162 aaKnown RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 CWF19L2Q2TBE0 894 aaKnown RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 CTAGE3PQ8IX95 158 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 RAB3IPQ96QF0 476 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 CBX8Q9HC52 389 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 SEPT10Q9P0V9 454 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 TRAF1Q13077 416 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 PAK1Q13153 545 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 WHAMMP3Q1A5X7 153 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 VWA3BQ502W6 1294 aa12.42□□□□□ -0.42
COL11A1-202ENST00000358392 UHMK1Q8TAS1 419 aaKnown RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 BZW2Q9Y6E2 419 aaKnown RBP12.42□□□□□ -0.42
COL11A1-202ENST00000358392 SORBS3O60504 671 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 GCNT3O95395 438 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 KRT71Q3SY84 523 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SNX21Q969T3 373 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SMTNP53814 917 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 RBBP5Q15291 538 aaKnown RBP12.41□□□□□ -0.42
COL11A1-202ENST00000358392 USH1GQ495M9 461 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 MIER3Q7Z3K6 550 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SCYL1Q96KG9 808 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
COL11A1-202ENST00000358392 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 RPSAP08865 295 aaKnown RBP12.41□□□□□ -0.42
COL11A1-202ENST00000358392 STX2P32856 288 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 KIF22Q14807 665 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 LONRF2Q1L5Z9 754 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
COL11A1-202ENST00000358392 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 TSC1Q92574 1164 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SEC24BO95487 1268 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SRGAP1Q7Z6B7 1085 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 TRMT44Q8IYL2 757 aaKnown RBP12.41□□□□□ -0.42
COL11A1-202ENST00000358392 RDH13Q8NBN7 331 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 STAMQ92783 540 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SLC12A2P55011 1212 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 KRT12Q99456 494 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 KCNH3Q9ULD8 1083 aa12.41□□□□□ -0.42
COL11A1-202ENST00000358392 ATP8B2P98198 1209 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 C4orf50Q6ZRC1 276 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 HVCN1Q96D96 273 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 AMOTL2Q9Y2J4 779 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 MBD4O95243 580 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 SERPINB6P35237 376 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 VPS41P49754 854 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 ADKP55263 362 aaKnown RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 GNGT1P63211 74 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 PEX26Q7Z412 305 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 LDHBP07195 334 aaKnown RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 GNAT2P19087 354 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 SLC9C1Q4G0N8 1177 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 RNF168Q8IYW5 571 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 MYCT1Q8N699 235 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 BICC1Q9H694 974 aaKnown RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 IL15P40933 162 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 ZNF75DP51815 510 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
COL11A1-202ENST00000358392 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
COL11A1-202ENST00000358392 PAK2Q13177 524 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms