RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 NAA25Q14CX7 972 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 POSTNQ15063 836 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
CNOT3-202ENST00000358389 MICU3Q86XE3 530 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 VPS16Q9H269 839 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 GNL3LQ9NVN8 582 aaKnown RBP12.92□□□□□ -0.34
CNOT3-202ENST00000358389 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 ABL1P00519 1130 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 CLNS1AP54105 237 aaKnown RBP12.92□□□□□ -0.34
CNOT3-202ENST00000358389 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
CNOT3-202ENST00000358389 MAN1B1Q9UKM7 699 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 COG1Q8WTW3 980 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 PHKBQ93100 1093 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 ZNF274Q96GC6 653 aaPredicted RBP12.91□□□□□ -0.34
CNOT3-202ENST00000358389 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CPP00450 1065 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 KIF23Q02241 960 aaPredicted RBP12.91□□□□□ -0.34
CNOT3-202ENST00000358389 E2F5Q15329 346 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 MICALCLQ6ZW33 695 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CNGA4Q8IV77 575 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 SELENOOQ9BVL4 669 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CEP126Q9P2H0 1117 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CEP85LQ5SZL2 805 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
CNOT3-202ENST00000358389 IDH1O75874 414 aaKnown RBP12.9□□□□□ -0.34
CNOT3-202ENST00000358389 SATB1Q01826 763 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 SAR1BQ9Y6B6 198 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 KRT9P35527 623 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
CNOT3-202ENST00000358389 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 FOXP4Q8IVH2 680 aaPredicted RBP12.9□□□□□ -0.34
CNOT3-202ENST00000358389 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 RPSAP08865 295 aaKnown RBP12.9□□□□□ -0.34
CNOT3-202ENST00000358389 CDC25AP30304 524 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 DNA2P51530 1060 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 GSCP56915 257 aaPredicted RBP12.9□□□□□ -0.34
CNOT3-202ENST00000358389 USPL1Q5W0Q7 1092 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 SMYD4Q8IYR2 804 aaPredicted RBP12.9□□□□□ -0.34
CNOT3-202ENST00000358389 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 PSMB7Q99436 277 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 MYD88Q99836 296 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
CNOT3-202ENST00000358389 HSF2BPO75031 334 aa12.9□□□□□ -0.35
CNOT3-202ENST00000358389 PDE6BP35913 854 aa12.9□□□□□ -0.35
CNOT3-202ENST00000358389 KRT40Q6A162 431 aa12.9□□□□□ -0.35
CNOT3-202ENST00000358389 KIRREL3Q8IZU9 778 aa12.9□□□□□ -0.35
CNOT3-202ENST00000358389 AIDAQ96BJ3 306 aa12.9□□□□□ -0.35
CNOT3-202ENST00000358389 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.35
CNOT3-202ENST00000358389 KCNG1Q9UIX4 513 aa12.9□□□□□ -0.35
CNOT3-202ENST00000358389 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 OPA1O60313 960 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 ELF1P32519 619 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 USP14P54578 494 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
CNOT3-202ENST00000358389 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
CNOT3-202ENST00000358389 TBX2Q13207 712 aaPredicted RBP12.89□□□□□ -0.35
CNOT3-202ENST00000358389 TNNI3KQ59H18 835 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
CNOT3-202ENST00000358389 MMS19Q96T76 1030 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 FPGT-TNNI3KV9GXZ4 949 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 MYO1BO43795 1136 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 IFT88Q13099 833 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 TMTC1Q8IUR5 882 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
CNOT3-202ENST00000358389 MACROD2A1Z1Q3 448 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 CHUKO15111 745 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 A1BGP04217 495 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 ATP5JP18859 108 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 STAMQ92783 540 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 TFR2Q9UP52 801 aa12.89□□□□□ -0.35
CNOT3-202ENST00000358389 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
CNOT3-202ENST00000358389 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■□□□□ 10.5
CNOT3-202ENST00000358389 CKAP4Q07065 602 aaKnown RBP12.88□□□□□ -0.35
CNOT3-202ENST00000358389 MFAP3LO75121 409 aa12.88□□□□□ -0.35
CNOT3-202ENST00000358389 EZRP15311 586 aaKnown RBP12.88□□□□□ -0.35
CNOT3-202ENST00000358389 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
CNOT3-202ENST00000358389 C2orf54Q08AI8 447 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms