RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PPARAQ07869 468 aa18.14■□□□□ 0.49
TPM1-206ENST00000358278 IMMTQ16891 758 aaKnown RBP18.14■□□□□ 0.49
TPM1-206ENST00000358278 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
TPM1-206ENST00000358278 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
TPM1-206ENST00000358278 EVX2Q03828 476 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 DCAF15Q66K64 600 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 STK11IPQ8N1F8 1099 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 EHD4Q9H223 541 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 DOCK1Q14185 1865 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 ROBO3Q96MS0 1386 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 PAPPA2Q9BXP8 1791 aa18.13■□□□□ 0.49
TPM1-206ENST00000358278 ZNF213O14771 459 aa18.12■□□□□ 0.49
TPM1-206ENST00000358278 ITGBL1O95965 494 aaPredicted RBP18.12■□□□□ 0.49
TPM1-206ENST00000358278 MIGA2Q7L4E1 593 aa18.12■□□□□ 0.49
TPM1-206ENST00000358278 HERC5Q9UII4 1024 aaKnown RBP18.12■□□□□ 0.49
TPM1-206ENST00000358278 FAM196BA6NMK8 535 aa18.12■□□□□ 0.49
TPM1-206ENST00000358278 CTDSPL2Q05D32 466 aa18.12■□□□□ 0.49
TPM1-206ENST00000358278 FMR1Q06787 632 aaKnown RBP eCLIP18.12■□□□□ 0.49
TPM1-206ENST00000358278 FOXP4Q8IVH2 680 aaPredicted RBP18.12■□□□□ 0.49
TPM1-206ENST00000358278 DYNLL2Q96FJ2 89 aa18.12■□□□□ 0.49
TPM1-206ENST00000358278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.12■□□□□ 0.49
TPM1-206ENST00000358278 SMIM22K7EJ46 135 aa18.11■□□□□ 0.49
TPM1-206ENST00000358278 PPP1R12BO60237 982 aaPredicted RBP18.11■□□□□ 0.49
TPM1-206ENST00000358278 SEC24BO95487 1268 aa18.11■□□□□ 0.49
TPM1-206ENST00000358278 FSTL1Q12841 308 aa18.11■□□□□ 0.49
TPM1-206ENST00000358278 PRKG1Q13976 671 aa18.11■□□□□ 0.49
TPM1-206ENST00000358278 TTLL12Q14166 644 aaPredicted RBP18.11■□□□□ 0.49
TPM1-206ENST00000358278 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
TPM1-206ENST00000358278 EPB41L2O43491 1005 aaKnown RBP18.1■□□□□ 0.49
TPM1-206ENST00000358278 CELF2O95319 508 aaKnown RBP18.1■□□□□ 0.49
TPM1-206ENST00000358278 SLURP2P0DP57 97 aa18.1■□□□□ 0.49
TPM1-206ENST00000358278 PDE4BQ07343 736 aa18.1■□□□□ 0.49
TPM1-206ENST00000358278 ZNF287Q9HBT7 754 aa18.1■□□□□ 0.49
TPM1-206ENST00000358278 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
TPM1-206ENST00000358278 ANAPC4Q9UJX5 808 aa18.1■□□□□ 0.49
TPM1-206ENST00000358278 TBC1D12O60347 775 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 CYP21A2P08686 494 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 MCCP23508 829 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 C16orf86Q6ZW13 317 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 SLC44A5Q8NCS7 719 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 ZNF341Q9BYN7 854 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 DNAJC18Q9H819 358 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 GABPAQ06546 454 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 NECTIN1Q15223 517 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 METTL16Q86W50 562 aaKnown RBP18.09■□□□□ 0.49
TPM1-206ENST00000358278 TBC1D10CQ8IV04 446 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 BACH2Q9BYV9 841 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 UPF2Q9HAU5 1272 aaKnown RBP18.09■□□□□ 0.49
TPM1-206ENST00000358278 MKNK2Q9HBH9 465 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 TOMM22Q9NS69 142 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 FZD1Q9UP38 647 aa18.09■□□□□ 0.49
TPM1-206ENST00000358278 MYH4Q9Y623 1939 aa18.08■□□□□ 0.48
TPM1-206ENST00000358278 SLC27A2O14975 620 aa18.08■□□□□ 0.48
TPM1-206ENST00000358278 CDK8P49336 464 aa18.08■□□□□ 0.48
TPM1-206ENST00000358278 MFSD6Q6ZSS7 791 aa18.08■□□□□ 0.48
TPM1-206ENST00000358278 NBPF3Q9H094 633 aa18.08■□□□□ 0.48
TPM1-206ENST00000358278 RNF41Q9H4P4 317 aaPredicted RBP18.08■□□□□ 0.48
TPM1-206ENST00000358278 ANGEL1Q9UNK9 670 aaKnown RBP18.08■□□□□ 0.48
TPM1-206ENST00000358278 ZKSCAN1P17029 563 aaPredicted RBP18.07■□□□□ 0.48
TPM1-206ENST00000358278 IREB2P48200 963 aaKnown RBP18.07■□□□□ 0.48
TPM1-206ENST00000358278 MAP3K10Q02779 954 aa18.07■□□□□ 0.48
TPM1-206ENST00000358278 AKNAD1Q5T1N1 836 aa18.07■□□□□ 0.48
TPM1-206ENST00000358278 ARMC9Q7Z3E5 817 aa18.07■□□□□ 0.48
TPM1-206ENST00000358278 STAG1Q8WVM7 1258 aa18.07■□□□□ 0.48
TPM1-206ENST00000358278 WRNIP1Q96S55 665 aa18.07■□□□□ 0.48
TPM1-206ENST00000358278 GBA2Q9HCG7 927 aaPredicted RBP18.07■□□□□ 0.48
TPM1-206ENST00000358278 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
TPM1-206ENST00000358278 PRDM1O75626 825 aa18.06■□□□□ 0.48
TPM1-206ENST00000358278 PCP11498 1178 aaKnown RBP18.06■□□□□ 0.48
TPM1-206ENST00000358278 SHMT1P34896 483 aa18.06■□□□□ 0.48
TPM1-206ENST00000358278 HSPA4P34932 840 aa18.06■□□□□ 0.48
TPM1-206ENST00000358278 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
TPM1-206ENST00000358278 C2orf69Q8N8R5 385 aa18.06■□□□□ 0.48
TPM1-206ENST00000358278 NEDD4P46934 1319 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 USP2O75604 605 aaPredicted RBP18.05■□□□□ 0.48
TPM1-206ENST00000358278 KCNA4P22459 653 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 FKBP1BP68106 108 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 TRDNQ13061 729 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 CERKLQ49MI3 558 aaPredicted RBP18.05■□□□□ 0.48
TPM1-206ENST00000358278 TATDN1Q6P1N9 297 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 ZNF444Q8N0Y2 327 aaPredicted RBP18.05■□□□□ 0.48
TPM1-206ENST00000358278 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 CNNM2Q9H8M5 875 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 INCENPQ9NQS7 918 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 TAF6LQ9Y6J9 622 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 PHIPQ8WWQ0 1821 aa18.05■□□□□ 0.48
TPM1-206ENST00000358278 PHF20L1A8MW92 1017 aa18.04■□□□□ 0.48
TPM1-206ENST00000358278 E7EWF7 191 aa18.04■□□□□ 0.48
TPM1-206ENST00000358278 RANBP6O60518 1105 aaKnown RBP18.04■□□□□ 0.48
TPM1-206ENST00000358278 CST9Q5W186 159 aa18.04■□□□□ 0.48
TPM1-206ENST00000358278 MOB2Q70IA6 237 aa18.04■□□□□ 0.48
TPM1-206ENST00000358278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.04■□□□□ 0.48
TPM1-206ENST00000358278 MPHOSPH10O00566 681 aaKnown RBP18.03■□□□□ 0.48
TPM1-206ENST00000358278 ORC4O43929 436 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 GDF11O95390 407 aa18.03■□□□□ 0.48
TPM1-206ENST00000358278 RASA1P20936 1047 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms