RNA–Protein interactions for RNA: ENST00000358015.7

RAD23B-201, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD23B, Length 4,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-201ENST00000358015 VPS54Q9P1Q0 977 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 KRT9P35527 623 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 NEK11Q8NG66 645 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 TTF2Q9UNY4 1162 aaKnown RBP18■□□□□ 0.47
RAD23B-201ENST00000358015 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 CCDC122Q5T0U0 273 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 ANKRD7Q92527 254 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 TAF4BQ92750 862 aa18■□□□□ 0.47
RAD23B-201ENST00000358015 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 IKQ13123 557 aaPredicted RBP17.99■□□□□ 0.47
RAD23B-201ENST00000358015 ODF2Q5BJF6 829 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 EXOC1Q9NV70 894 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 STX10O60499 249 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 PPP6R2O75170 966 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 KRT83P78385 493 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
RAD23B-201ENST00000358015 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
RAD23B-201ENST00000358015 FAM114A1Q8IWE2 563 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 ALS2CR12Q96Q35 445 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 TAB2Q9NYJ8 693 aa17.99■□□□□ 0.47
RAD23B-201ENST00000358015 CALM1P0DP23 149 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 CALM2P0DP24 149 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 CALM3P0DP25 149 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 TERF2Q15554 542 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 USPL1Q5W0Q7 1092 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 IFNL3Q8IZI9 196 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 SPATA5Q8NB90 893 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 LPIN2Q92539 896 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 CRNKL1Q9BZJ0 848 aaKnown RBP17.98■□□□□ 0.47
RAD23B-201ENST00000358015 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
RAD23B-201ENST00000358015 KIF5AQ12840 1032 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 SLF1Q9BQI6 1058 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 OSBPL5Q9H0X9 879 aaPredicted RBP17.98■□□□□ 0.47
RAD23B-201ENST00000358015 MED23Q9ULK4 1368 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 CTIFO43310 598 aaKnown RBP17.98■□□□□ 0.47
RAD23B-201ENST00000358015 CIAO1O76071 339 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 AMPD3Q01432 767 aa17.98■□□□□ 0.47
RAD23B-201ENST00000358015 PIK3AP1Q6ZUJ8 805 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 CALML4Q96GE6 196 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 PDE8AO60658 829 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 TUBBP07437 444 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 ASIC1P78348 528 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 TMTC1Q8IUR5 882 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 CCDC42Q96M95 316 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.97■□□□□ 0.479e-12■■□□□ 12.7
RAD23B-201ENST00000358015 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 RDXP35241 583 aaKnown RBP17.97■□□□□ 0.47
RAD23B-201ENST00000358015 TTC38Q5R3I4 469 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 CYP26C1Q6V0L0 522 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 HEATR3Q7Z4Q2 680 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 GRAMD1CQ8IYS0 662 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 KCNB2Q92953 911 aa17.97■□□□□ 0.47
RAD23B-201ENST00000358015 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
RAD23B-201ENST00000358015 FGFR1OPO95684 399 aaKnown RBP17.96■□□□□ 0.47
RAD23B-201ENST00000358015 ST3GAL1Q11201 340 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 VSTM4Q8IW00 320 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 TSG101Q99816 390 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.478e-7■□□□□ 8.1
RAD23B-201ENST00000358015 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.47
RAD23B-201ENST00000358015 H7C1W4 665 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 WWC2Q6AWC2 1192 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 TMEM131LA2VDJ0 1609 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 PHKA1P46020 1223 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 DTHD1Q6ZMT9 781 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 FCHSD1Q86WN1 690 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.96■□□□□ 0.47
RAD23B-201ENST00000358015 ZNF609O15014 1411 aa17.96■□□□□ 0.47
RAD23B-201ENST00000358015 CALML3P27482 149 aa17.96■□□□□ 0.46
RAD23B-201ENST00000358015 CCZ1BP86790 482 aa17.96■□□□□ 0.46
RAD23B-201ENST00000358015 CCZ1P86791 482 aaPredicted RBP17.96■□□□□ 0.46
RAD23B-201ENST00000358015 ZNF287Q9HBT7 754 aa17.96■□□□□ 0.46
RAD23B-201ENST00000358015 PAK1Q13153 545 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 NAA15Q9BXJ9 866 aaKnown RBP17.95■□□□□ 0.46
RAD23B-201ENST00000358015 MMRN2Q9H8L6 949 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 PNMA6AP0CW24 399 aaPredicted RBP17.95■□□□□ 0.46
RAD23B-201ENST00000358015 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 GREM2Q9H772 168 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 PREX1Q8TCU6 1659 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 ZSCAN26Q16670 478 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 TMEM266Q2M3C6 531 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 ARMCX5Q6P1M9 558 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 RAB34Q9BZG1 259 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 ANKARQ7Z5J8 1434 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 PTPRUQ92729 1446 aa17.95■□□□□ 0.46
RAD23B-201ENST00000358015 MACROD2A1Z1Q3 448 aa17.94■□□□□ 0.46
RAD23B-201ENST00000358015 TACC1O75410 805 aa17.94■□□□□ 0.46
RAD23B-201ENST00000358015 PCCAP05165 728 aaPredicted RBP17.94■□□□□ 0.46
RAD23B-201ENST00000358015 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
RAD23B-201ENST00000358015 CCDC40Q4G0X9 1142 aa17.94■□□□□ 0.46
RAD23B-201ENST00000358015 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
RAD23B-201ENST00000358015 RASSF4Q9H2L5 321 aa17.94■□□□□ 0.46
RAD23B-201ENST00000358015 TUBB2AQ13885 445 aa17.94■□□□□ 0.46
RAD23B-201ENST00000358015 UBE3CQ15386 1083 aa17.94■□□□□ 0.46
RAD23B-201ENST00000358015 TRIML1Q8N9V2 468 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms