RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MAP3K9P80192 1104 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 INTS13Q9NVM9 706 aa20.28■□□□□ 0.84
RTN4-204ENST00000357732 DOCK2Q92608 1830 aa20.27■□□□□ 0.84
RTN4-204ENST00000357732 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.84
RTN4-204ENST00000357732 TMTC2Q8N394 836 aa20.27■□□□□ 0.84
RTN4-204ENST00000357732 BCL11BQ9C0K0 894 aaPredicted RBP20.27■□□□□ 0.84
RTN4-204ENST00000357732 PIH1D3Q9NQM4 214 aaKnown RBP20.27■□□□□ 0.84
RTN4-204ENST00000357732 CNNM1Q9NRU3 951 aa20.27■□□□□ 0.84
RTN4-204ENST00000357732 MAN1B1Q9UKM7 699 aa20.27■□□□□ 0.84
RTN4-204ENST00000357732 IDH1O75874 414 aaKnown RBP20.27■□□□□ 0.83
RTN4-204ENST00000357732 GPTP24298 496 aa20.27■□□□□ 0.83
RTN4-204ENST00000357732 CASQ1P31415 396 aa20.27■□□□□ 0.83
RTN4-204ENST00000357732 MORC3Q14149 939 aa20.27■□□□□ 0.83
RTN4-204ENST00000357732 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.83
RTN4-204ENST00000357732 LRRN4CLQ8ND94 238 aa20.27■□□□□ 0.83
RTN4-204ENST00000357732 SMARCE1Q969G3 411 aa20.27■□□□□ 0.83
RTN4-204ENST00000357732 FBXO2Q9UK22 296 aaPredicted RBP20.27■□□□□ 0.83
RTN4-204ENST00000357732 DENND2AQ9ULE3 1009 aa20.27■□□□□ 0.83
RTN4-204ENST00000357732 STARD3NLO95772 234 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 BMP6P22004 513 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 HLFQ16534 295 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 JAKMIP3Q5VZ66 844 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 STK11IPQ8N1F8 1099 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 SPATA20Q8TB22 786 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 SLC26A6Q9BXS9 759 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 TOGARAM1Q9Y4F4 1720 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 NPHP1O15259 732 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 DEXIO95424 95 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 GNAT2P19087 354 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 PPP2R5BQ15173 497 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 TC2NQ8N9U0 490 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 NAA15Q9BXJ9 866 aaKnown RBP20.26■□□□□ 0.83
RTN4-204ENST00000357732 GREM2Q9H772 168 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 NFE2L3Q9Y4A8 694 aa20.26■□□□□ 0.83
RTN4-204ENST00000357732 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
RTN4-204ENST00000357732 TUBB4BP68371 445 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 TEX35Q5T0J7 233 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 PIGBQ92521 554 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 LPIN2Q92539 896 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 NAPBQ9H115 298 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 SRPRBQ9Y5M8 271 aaKnown RBP20.25■□□□□ 0.83
RTN4-204ENST00000357732 MRFAP1Q9Y605 127 aa20.25■□□□□ 0.83
RTN4-204ENST00000357732 MROH5Q6ZUA9 1318 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 RXRAP19793 462 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 CDK11BP21127 795 aaKnown RBP20.24■□□□□ 0.83
RTN4-204ENST00000357732 HSPA2P54652 639 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 EVA1CP58658 441 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 PDE4BQ07343 736 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 PUM3Q15397 648 aaKnown RBP20.24■□□□□ 0.83
RTN4-204ENST00000357732 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 DIS3L2Q8IYB7 885 aaKnown RBP20.24■□□□□ 0.83
RTN4-204ENST00000357732 IFNL3Q8IZI9 196 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 PANX2Q96RD6 677 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 CARD6Q9BX69 1037 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 CALCOCO1Q9P1Z2 691 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 ZSWIM5Q9P217 1185 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 SOS2Q07890 1332 aaPredicted RBP20.24■□□□□ 0.83
RTN4-204ENST00000357732 MAP3K12Q12852 859 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 TUBB2AQ13885 445 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 TUBB2BQ9BVA1 445 aa20.24■□□□□ 0.83
RTN4-204ENST00000357732 CYP2C19P33261 490 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 PLA2G4AP47712 749 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
RTN4-204ENST00000357732 PLCD1P51178 756 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 STAG1Q8WVM7 1258 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 RABGGTAQ92696 567 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
RTN4-204ENST00000357732 AK7Q96M32 723 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 SENP2Q9HC62 589 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 RAI14Q9P0K7 980 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 FANCGO15287 622 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 RTN1Q16799 776 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 UBXN6Q9BZV1 441 aa20.23■□□□□ 0.83
RTN4-204ENST00000357732 PNPLA7Q6ZV29 1317 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 A0A1B0GTH6 734 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 SEMA3EO15041 775 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 GNG11P61952 73 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 NR1I3Q14994 352 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 RSRC2Q7L4I2 434 aaKnown RBP20.22■□□□□ 0.83
RTN4-204ENST00000357732 NACAP1Q9BZK3 213 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 MYO5AQ9Y4I1 1855 aaKnown RBP20.22■□□□□ 0.83
RTN4-204ENST00000357732 BTBD18B2RXH4 712 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 POLR2DO15514 142 aaKnown RBP20.22■□□□□ 0.83
RTN4-204ENST00000357732 PDE8AO60658 829 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 FGFR2P21802 821 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 WWC3Q9ULE0 1092 aa20.22■□□□□ 0.83
RTN4-204ENST00000357732 ERICH2A1L162 156 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 BMP15O95972 392 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 PPP2R3AQ06190 1150 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 CTAGE1Q96RT6 745 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 RNF41Q9H4P4 317 aaPredicted RBP20.21■□□□□ 0.83
RTN4-204ENST00000357732 EPB41L4AQ9HCS5 686 aaPredicted RBP20.21■□□□□ 0.83
RTN4-204ENST00000357732 ACTN4O43707 911 aaKnown RBP20.21■□□□□ 0.83
RTN4-204ENST00000357732 CCDC175P0C221 793 aa20.21■□□□□ 0.83
RTN4-204ENST00000357732 PHKA1P46020 1223 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms