RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 KIF5CO60282 957 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 PRPF6O94906 941 aaKnown RBP13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 ERCC5P28715 1186 aaPredicted RBP13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 POSTNQ15063 836 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 CT47A1Q5JQC4 288 aaPredicted RBP13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 NCOA7Q8NI08 942 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 ALG1Q9BT22 464 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 GBP3Q9H0R5 595 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 LRRIQ3A6PVS8 624 aaPredicted RBP13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 GCP02774 474 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 AMPD2Q01433 879 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 LZTFL1Q9NQ48 299 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 SAMSN1Q9NSI8 373 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 JRKLQ9Y4A0 524 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 MYL6BP14649 208 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 NTRK3Q16288 839 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 CERS3Q8IU89 383 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
SMARCAL1-201ENST00000357276 SOS2Q07890 1332 aaPredicted RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 SYF2O95926 243 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 GTF2A1P52655 376 aaPredicted RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 TIMM10P62072 90 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 WWC2Q6AWC2 1192 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 SUGP1Q8IWZ8 645 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 NBPF3Q9H094 633 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 MYH8P13535 1937 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 CTAGE9A4FU28 777 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 PLCD1P51178 756 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 RBL2Q08999 1139 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 HSP90AA4PQ58FG1 418 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 MYO1AQ9UBC5 1043 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 HOOK1Q9UJC3 728 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 PKD1L3Q7Z443 1732 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 TEX33O43247 280 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 MFAP3LO75121 409 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 PIP4K2BP78356 416 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 TAF7LQ5H9L4 462 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 SLC9C2Q5TAH2 1124 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 LMBR1LQ6UX01 489 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 BRINP3Q76B58 766 aa13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 ADD3Q9UEY8 706 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-201ENST00000357276 LRP6O75581 1613 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 H7C1W4 665 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 ARHGAP25P42331 645 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 HAND2P61296 217 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZNF569Q5MCW4 686 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 CDKAL1Q5VV42 579 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 FBXO2Q9UK22 296 aaPredicted RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 TTF2Q9UNY4 1162 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 ITIH6Q6UXX5 1313 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 A0A087WZG4 1122 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 SHOX2O60902 331 aaPredicted RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 CDKL5O76039 1030 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 ATP2B1P20020 1258 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 PTPREP23469 700 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 RAB11FIP4Q86YS3 637 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 TRMT44Q8IYL2 757 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 SLC35F6Q8N357 371 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 CCDC51Q96ER9 411 aa13.78□□□□□ -0.2
SMARCAL1-201ENST00000357276 ACTN4O43707 911 aaKnown RBP13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 TFRCP02786 760 aaKnown RBP13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZFYP08048 801 aaPredicted RBP13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 NEUROD6Q96NK8 337 aa13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 FAM204AQ9H8W3 233 aa13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 SEC31BQ9NQW1 1179 aa13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 ANGEL1Q9UNK9 670 aaKnown RBP13.77□□□□□ -0.2
SMARCAL1-201ENST00000357276 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 CTAGE15A4D2H0 777 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 CTAGE8P0CG41 777 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 TOB1P50616 345 aaPredicted RBP13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 CTAGE6Q86UF2 777 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 CTAGE4Q8IX94 777 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 NKX2-3Q8TAU0 364 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 SLC52A2Q9HAB3 445 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 SLAIN2Q9P270 581 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 STK36Q9NRP7 1315 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 SEMA3EO15041 775 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 CIAO1O76071 339 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 CUL4BQ13620 913 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 IGSF22Q8N9C0 903 aa13.77□□□□□ -0.21
SMARCAL1-201ENST00000357276 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms