RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 PSMB7Q99436 277 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 MKNK2Q9HBH9 465 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 COPRSQ9NQ92 184 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 TAB2Q9NYJ8 693 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 SASH3O75995 380 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 SSR1P43307 286 aaKnown RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 UBXN1Q04323 297 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 TTC19Q6DKK2 380 aaPredicted RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 CNGA4Q8IV77 575 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 INO80Q9ULG1 1556 aaPredicted RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 ARHGEF28Q8N1W1 1705 aaKnown RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 CASP14P31944 242 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 ENOX2Q16206 610 aaKnown RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 KCNB2Q92953 911 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 OSBP2Q969R2 916 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 EEF2KMTQ96G04 330 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
BDNF-202ENST00000356660 KIF28PB7ZC32 967 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 C19orf44Q9H6X5 657 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 CTNND2Q9UQB3 1225 aa14.19□□□□□ -0.14
BDNF-202ENST00000356660 MACROD2A1Z1Q3 448 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 M0R2C6 588 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 N4BP1O75113 896 aaKnown RBP14.18□□□□□ -0.14
BDNF-202ENST00000356660 TRIM21P19474 475 aaKnown RBP14.18□□□□□ -0.14
BDNF-202ENST00000356660 ZAP70P43403 619 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 RBL2Q08999 1139 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 CASP8Q14790 479 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 RTN1Q16799 776 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 FAM76AQ8TAV0 307 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 CTAGE1Q96RT6 745 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 LCMT1Q9UIC8 334 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 ZFYP08048 801 aaPredicted RBP14.18□□□□□ -0.14
BDNF-202ENST00000356660 MCM3P25205 808 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 CDR1P51861 262 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 PI16Q6UXB8 463 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 SYNRGQ9UMZ2 1314 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 ATP2C2O75185 946 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 SLC5A1P13866 664 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 SPA17Q15506 151 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
BDNF-202ENST00000356660 PPLO60437 1756 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 EYA2O00167 538 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 CASP1P29466 404 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 STIM1Q13586 685 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 TSGA10IPQ3SY00 556 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 ZMYM1Q5SVZ6 1142 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 SRLQ86TD4 932 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 REXO1L1PQ8IX06 675 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 MRFAP1Q9Y605 127 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 LMTK2Q8IWU2 1503 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 ODF2Q5BJF6 829 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 MFSD6Q6ZSS7 791 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
BDNF-202ENST00000356660 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 TRIM75PA6NK02 468 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 ZPR1O75312 459 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 FDPSP14324 419 aaKnown RBP14.17□□□□□ -0.14
BDNF-202ENST00000356660 CCT5P48643 541 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 WTAPQ15007 396 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 IQCEQ6IPM2 695 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 BLZF1Q9H2G9 400 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
BDNF-202ENST00000356660 TTF2Q9UNY4 1162 aaKnown RBP14.17□□□□□ -0.14
BDNF-202ENST00000356660 GOLGA6CA6NDK9 693 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 EIF3CLB5ME19 914 aaKnown RBP14.16□□□□□ -0.14
BDNF-202ENST00000356660 GOLGA6DP0CG33 693 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 DZIP1Q86YF9 867 aaKnown RBP14.16□□□□□ -0.14
BDNF-202ENST00000356660 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 PLIN2Q99541 437 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 EIF3CQ99613 913 aaKnown RBP14.16□□□□□ -0.14
BDNF-202ENST00000356660 GOLGA6AQ9NYA3 693 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 MKRN1Q9UHC7 482 aaKnown RBP14.16□□□□□ -0.14
BDNF-202ENST00000356660 MED23Q9ULK4 1368 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 TEX33O43247 280 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 RNF40O75150 1001 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 ZNF174Q15697 407 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 ICE2Q659A1 982 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 IQCA1Q86XH1 822 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 GIMAP7Q8NHV1 300 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 XAGE2Q96GT9 111 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 ALDH8A1Q9H2A2 487 aaPredicted RBP14.16□□□□□ -0.14
BDNF-202ENST00000356660 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 CCDC96Q2M329 555 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 CTCFLQ8NI51 663 aaPredicted RBP14.16□□□□□ -0.14
BDNF-202ENST00000356660 TRIM47Q96LD4 638 aa14.16□□□□□ -0.14
BDNF-202ENST00000356660 SHC4Q6S5L8 630 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 APPBP2Q92624 585 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 MRPL44Q9H9J2 332 aaKnown RBP14.15□□□□□ -0.14
BDNF-202ENST00000356660 MYO6Q9UM54 1294 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 LUC7L2Q9Y383 392 aaKnown RBP14.15□□□□□ -0.14
BDNF-202ENST00000356660 ZNF609O15014 1411 aa14.15□□□□□ -0.14
BDNF-202ENST00000356660 H3BQF6 201 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms