RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 APLP1P51693 650 aa18.53■□□□□ 0.56
TRIM13-201ENST00000356017 MAP3K11Q16584 847 aa18.53■□□□□ 0.56
TRIM13-201ENST00000356017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRIM13-201ENST00000356017 UNCXA6NJT0 531 aa18.52■□□□□ 0.56
TRIM13-201ENST00000356017 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
TRIM13-201ENST00000356017 SLC3A2P08195 630 aaKnown RBP18.52■□□□□ 0.56
TRIM13-201ENST00000356017 C1QTNF8P60827 252 aa18.52■□□□□ 0.56
TRIM13-201ENST00000356017 SLC4A8Q2Y0W8 1093 aa18.52■□□□□ 0.56
TRIM13-201ENST00000356017 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
TRIM13-201ENST00000356017 SSC5DA1L4H1 1573 aa18.52■□□□□ 0.56
TRIM13-201ENST00000356017 USP2O75604 605 aaPredicted RBP18.52■□□□□ 0.55
TRIM13-201ENST00000356017 REC8O95072 547 aa18.52■□□□□ 0.55
TRIM13-201ENST00000356017 PRKG1Q13976 671 aa18.52■□□□□ 0.55
TRIM13-201ENST00000356017 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.55
TRIM13-201ENST00000356017 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.55
TRIM13-201ENST00000356017 ANGEL1Q9UNK9 670 aaKnown RBP18.52■□□□□ 0.55
TRIM13-201ENST00000356017 CYP2D6P10635 497 aa18.51■□□□□ 0.55
TRIM13-201ENST00000356017 MAP4K1Q92918 833 aa18.51■□□□□ 0.55
TRIM13-201ENST00000356017 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
TRIM13-201ENST00000356017 NAV1Q8NEY1 1877 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 GABPAQ06546 454 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 PPARAQ07869 468 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 CREBZFQ9NS37 354 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 ZNF112Q9UJU3 913 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 ANAPC4Q9UJX5 808 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
TRIM13-201ENST00000356017 DDX60LQ5H9U9 1706 aaKnown RBP18.5■□□□□ 0.55
TRIM13-201ENST00000356017 MYH1P12882 1939 aa18.5■□□□□ 0.55
TRIM13-201ENST00000356017 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 ZNF213O14771 459 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 MAP3K9P80192 1104 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 PTH1RQ03431 593 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 IMMTQ16891 758 aaKnown RBP18.49■□□□□ 0.55
TRIM13-201ENST00000356017 ANKRD13AQ8IZ07 590 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 WRNIP1Q96S55 665 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 LSG1Q9H089 658 aaKnown RBP18.49■□□□□ 0.55
TRIM13-201ENST00000356017 ROBO3Q96MS0 1386 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 PAPPA2Q9BXP8 1791 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 PDE4BQ07343 736 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 LDLRAD1Q5T700 205 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 TATDN1Q6P1N9 297 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 SAPCD2Q86UD0 394 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRIM13-201ENST00000356017 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
TRIM13-201ENST00000356017 TLL2Q9Y6L7 1015 aa18.49■□□□□ 0.55
TRIM13-201ENST00000356017 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
TRIM13-201ENST00000356017 PHF20L1A8MW92 1017 aa18.48■□□□□ 0.55
TRIM13-201ENST00000356017 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
TRIM13-201ENST00000356017 CTNND1O60716 968 aaKnown RBP18.48■□□□□ 0.55
TRIM13-201ENST00000356017 HUNKP57058 714 aa18.48■□□□□ 0.55
TRIM13-201ENST00000356017 FZD1Q9UP38 647 aa18.48■□□□□ 0.55
TRIM13-201ENST00000356017 CSADQ9Y600 493 aa18.48■□□□□ 0.55
TRIM13-201ENST00000356017 TRPM7Q96QT4 1865 aa18.48■□□□□ 0.55
TRIM13-201ENST00000356017 UBE2Q2LH0YL09 131 aa18.47■□□□□ 0.55
TRIM13-201ENST00000356017 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
TRIM13-201ENST00000356017 CDK8P49336 464 aa18.47■□□□□ 0.55
TRIM13-201ENST00000356017 MOB2Q70IA6 237 aa18.47■□□□□ 0.55
TRIM13-201ENST00000356017 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
TRIM13-201ENST00000356017 HHIPL1Q96JK4 782 aa18.47■□□□□ 0.55
TRIM13-201ENST00000356017 MKNK2Q9HBH9 465 aa18.47■□□□□ 0.55
TRIM13-201ENST00000356017 BAZ2AQ9UIF9 1905 aaKnown RBP18.46■□□□□ 0.55
TRIM13-201ENST00000356017 EVX2Q03828 476 aa18.46■□□□□ 0.55
TRIM13-201ENST00000356017 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
TRIM13-201ENST00000356017 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
TRIM13-201ENST00000356017 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
TRIM13-201ENST00000356017 SLURP2P0DP57 97 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 HSPA6P17066 643 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 SHMT1P34896 483 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 CAP2P40123 477 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.45■□□□□ 0.54
TRIM13-201ENST00000356017 CCDC17Q96LX7 622 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 RBM8AQ9Y5S9 174 aaKnown RBP18.45■□□□□ 0.54
TRIM13-201ENST00000356017 SMIM22K7EJ46 135 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 INPP5BP32019 993 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 NT5C2P49902 561 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 HAND2P61296 217 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 CTDSPL2Q05D32 466 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 VGLL4Q14135 290 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 NOL9Q5SY16 702 aaKnown RBP18.45■□□□□ 0.54
TRIM13-201ENST00000356017 RNF20Q5VTR2 975 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 SCYL3Q8IZE3 742 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 ZKSCAN4Q969J2 545 aaPredicted RBP18.45■□□□□ 0.54
TRIM13-201ENST00000356017 SLC10A4Q96EP9 437 aa18.45■□□□□ 0.54
TRIM13-201ENST00000356017 ASNSP08243 561 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 FGRP09769 529 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 AKNAD1Q5T1N1 836 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 MFSD6Q6ZSS7 791 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
TRIM13-201ENST00000356017 STK11IPQ8N1F8 1099 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 STAG1Q8WVM7 1258 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 PICK1Q9NRD5 415 aa18.44■□□□□ 0.54
TRIM13-201ENST00000356017 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
TRIM13-201ENST00000356017 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
TRIM13-201ENST00000356017 RGMBQ6NW40 437 aa18.43■□□□□ 0.54
TRIM13-201ENST00000356017 SIPA1L1O43166 1804 aa18.43■□□□□ 0.54
TRIM13-201ENST00000356017 ORC4O43929 436 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms