RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 BRINP3Q76B58 766 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 ZNF335Q9H4Z2 1342 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-202ENST00000355815 CCDC194A0A1B0GVG4 234 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 MPHOSPH10O00566 681 aaKnown RBP15.94■□□□□ 0.14
SREBF1-202ENST00000355815 PDE8BO95263 885 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 E2F4Q16254 413 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 LPIN2Q92539 896 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 CEP131Q9UPN4 1083 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 GOLGA6L9A6NEM1 432 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 YEATS4O95619 227 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 MCAMP43121 646 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 LONRF3Q496Y0 759 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 SOGA3Q5TF21 947 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 GIGYF2Q6Y7W6 1299 aaKnown RBP15.94■□□□□ 0.14
SREBF1-202ENST00000355815 NBPF11Q86T75 865 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 PDLIM2Q96JY6 352 aa15.94■□□□□ 0.14
SREBF1-202ENST00000355815 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-202ENST00000355815 SMC1AQ14683 1233 aaKnown RBP15.93■□□□□ 0.14
SREBF1-202ENST00000355815 BRAPQ7Z569 592 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 ZNF274Q96GC6 653 aaPredicted RBP15.93■□□□□ 0.14
SREBF1-202ENST00000355815 NLRP3Q96P20 1036 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 SETDB2Q96T68 719 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 PIH1D3Q9NQM4 214 aaKnown RBP15.93■□□□□ 0.14
SREBF1-202ENST00000355815 MYO6Q9UM54 1294 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 FOXO4P98177 505 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 UTP14CQ5TAP6 766 aaKnown RBP15.93■□□□□ 0.14
SREBF1-202ENST00000355815 ATG9AQ7Z3C6 839 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 IFNL3Q8IZI9 196 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 WDR17Q8IZU2 1322 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 TRIM75PA6NK02 468 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 NAA25Q14CX7 972 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 FAM98CQ17RN3 349 aaKnown RBP15.93■□□□□ 0.14
SREBF1-202ENST00000355815 MICALCLQ6ZW33 695 aa15.93■□□□□ 0.14
SREBF1-202ENST00000355815 POTEB2H3BUK9 544 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 CCDC175P0C221 793 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 NLRP10Q86W26 655 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 KIAA1468Q9P260 1216 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 TTLL11Q8NHH1 800 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 SEC31AO94979 1220 aaKnown RBP15.92■□□□□ 0.14
SREBF1-202ENST00000355815 IDEP14735 1019 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 FANCCQ00597 558 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 CACNA2D4Q7Z3S7 1137 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 GRAMD1CQ8IYS0 662 aa15.92■□□□□ 0.14
SREBF1-202ENST00000355815 KRI1Q8N9T8 703 aaKnown RBP15.92■□□□□ 0.14
SREBF1-202ENST00000355815 SAP30BPQ9UHR5 308 aaKnown RBP15.92■□□□□ 0.14
SREBF1-202ENST00000355815 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 ADALQ6DHV7 355 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 KAT14Q9H8E8 782 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 CNNM2Q9H8M5 875 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 LUC7LQ9NQ29 371 aaKnown RBP15.91■□□□□ 0.14
SREBF1-202ENST00000355815 CTAGE9A4FU28 777 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 HEATR3Q7Z4Q2 680 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 CCT6AP40227 531 aaKnown RBP15.91■□□□□ 0.14
SREBF1-202ENST00000355815 NR5A1Q13285 461 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 CARMIL3Q8ND23 1372 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 USP17L12C9JPN9 530 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 USP17L21D6R901 530 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 UBA7P41226 1012 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 GOLPH3LQ9H4A5 285 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
SREBF1-202ENST00000355815 AKNAD1Q5T1N1 836 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 ZSWIM5Q9P217 1185 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 TMCO5BA8MYB1 307 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 HGSO14964 777 aaPredicted RBP15.9■□□□□ 0.14
SREBF1-202ENST00000355815 GNPATO15228 680 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 PICALMQ13492 652 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 PRPF4BQ13523 1007 aaKnown RBP15.9■□□□□ 0.14
SREBF1-202ENST00000355815 APOA5Q6Q788 366 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 CCDC114Q96M63 670 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.9■□□□□ 0.14
SREBF1-202ENST00000355815 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
SREBF1-202ENST00000355815 TECPR2O15040 1411 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 RFC4P35249 363 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 GYS2P54840 703 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 SEPT7Q16181 437 aaKnown RBP15.89■□□□□ 0.13
SREBF1-202ENST00000355815 KIAA1524Q8TCG1 905 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 PLEKHA4Q9H4M7 779 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 AKR1B10O60218 316 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 MCM3P25205 808 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 EIF6P56537 245 aaKnown RBP15.89■□□□□ 0.13
SREBF1-202ENST00000355815 MYL5Q02045 173 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 CCDC91Q7Z6B0 441 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 BAG1Q99933 345 aaPredicted RBP15.89■□□□□ 0.13
SREBF1-202ENST00000355815 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 SERTAD1Q9UHV2 236 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 MTIF2P46199 727 aaKnown RBP15.89■□□□□ 0.13
SREBF1-202ENST00000355815 PIK3AP1Q6ZUJ8 805 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
SREBF1-202ENST00000355815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.137e-7■■■■□ 20.8
SREBF1-202ENST00000355815 NFE2L3Q9Y4A8 694 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 ZNF609O15014 1411 aa15.89■□□□□ 0.13
SREBF1-202ENST00000355815 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
SREBF1-202ENST00000355815 ADKP55263 362 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms