RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ZKSCAN3Q9BRR0 538 aa25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 RIOK1Q9BRS2 568 aaKnown RBP25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 BRIP1Q9BX63 1249 aa25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 MINDY4BA8MYZ0 360 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 LRMPQ12912 555 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 SHC4Q6S5L8 630 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 ADGRA1Q86SQ6 560 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 NBPF11Q86T75 865 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 LRRC8AQ8IWT6 810 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 ZNF654Q8IZM8 581 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 CACTINQ8WUQ7 758 aaKnown RBP25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 FAM84BQ96KN1 310 aaPredicted RBP25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 NARFQ9UHQ1 456 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 CASZ1Q86V15 1759 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 DPCR1Q3MIW9 517 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 CCDC144BQ3MJ40 725 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 C3orf67Q6ZVT6 689 aa25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 MTERF4Q7Z6M4 381 aaKnown RBP25.68■■□□□ 1.7
NKX2-1-201ENST00000354822 MROH7-TTC4A0A0A0MT08 1334 aa25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 A0A087WWV3 80 aa25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 RILPL1Q5EBL4 403 aa25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 ELOA2Q8IYF1 753 aaPredicted RBP25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 SDR42E1Q8WUS8 393 aa25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 BCL2L12Q9HB09 334 aa25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 TUBE1Q9UJT0 475 aa25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 PDS5AQ29RF7 1337 aaKnown RBP25.67■■□□□ 1.7
NKX2-1-201ENST00000354822 TBC1D9BQ66K14 1250 aa25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 TMED8Q6PL24 325 aaPredicted RBP25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 FBXO33Q7Z6M2 555 aa25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 ECM29Q5VYK3 1845 aa25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 SEC23AQ15436 765 aa25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 DIS3L2Q8IYB7 885 aaKnown RBP25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 KRI1Q8N9T8 703 aaKnown RBP25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 NLRP3Q96P20 1036 aa25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 IMPACTQ9P2X3 320 aa25.66■■□□□ 1.7
NKX2-1-201ENST00000354822 GSDMDP57764 484 aa25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 DHX8Q14562 1220 aaKnown RBP25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 CCNL1Q9UK58 526 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 BTBD18B2RXH4 712 aa25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 IKBKBO14920 756 aa25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 GUCY1A2P33402 732 aa25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 RPS8P62241 208 aaKnown RBP25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 MEX3CQ5U5Q3 659 aaKnown RBP25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 BICDL1Q6ZP65 573 aa25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 GJD4Q96KN9 370 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 RNF26Q9BY78 433 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 ANKRD2Q9GZV1 360 aa25.65■■□□□ 1.7
NKX2-1-201ENST00000354822 COL4A1P02462 1669 aa25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 FGRP09769 529 aa25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 NUP133Q8WUM0 1156 aa25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 CELF1Q92879 486 aaKnown RBP25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 FBXW7Q969H0 707 aa25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 SETDB2Q96T68 719 aa25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 A0A1B0GUL6 1792 aa25.64■■□□□ 1.7
NKX2-1-201ENST00000354822 TNKSO95271 1327 aa25.64■■□□□ 1.69
NKX2-1-201ENST00000354822 LY75O60449 1722 aa25.64■■□□□ 1.69
NKX2-1-201ENST00000354822 COL24A1Q17RW2 1714 aa25.64■■□□□ 1.69
NKX2-1-201ENST00000354822 GNPATO15228 680 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 XBP1P17861 261 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 FAM13BQ9NYF5 915 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 HOOK1Q9UJC3 728 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 AKAP17AQ02040 695 aaKnown RBP25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 STK11IPQ8N1F8 1099 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 ZSCAN10Q96SZ4 725 aaPredicted RBP25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 TAOK2Q9UL54 1235 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 KCNH3Q9ULD8 1083 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 CEP131Q9UPN4 1083 aa25.63■■□□□ 1.69
NKX2-1-201ENST00000354822 COL1A1P02452 1464 aaPredicted RBP25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 UBE2Q2LH0YL09 131 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 SMIM5Q71RC9 77 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 IQCA1Q86XH1 822 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 NOL10Q9BSC4 688 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 TAF1LQ8IZX4 1826 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 CACNA1SQ13698 1873 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 BIN1O00499 593 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 ZBTB22O15209 634 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 ZPR1O75312 459 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 FAM182BQ5T319 152 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 SRP68Q9UHB9 627 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 RTCBQ9Y3I0 505 aaKnown RBP25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 SBF2Q86WG5 1849 aa25.62■■□□□ 1.69
NKX2-1-201ENST00000354822 CALM1P0DP23 149 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 CALM2P0DP24 149 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 CALM3P0DP25 149 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 RBM10P98175 930 aaKnown RBP25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 CATIPQ7Z7H3 387 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 CLIC6Q96NY7 704 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 OSBPL5Q9H0X9 879 aaPredicted RBP25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 RBM28Q9NW13 759 aaKnown RBP25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 KCNJ14Q9UNX9 436 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 TOB1P50616 345 aaPredicted RBP25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 TPTE2Q6XPS3 522 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 KRBA2Q6ZNG9 492 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 ZNF579Q8NAF0 562 aaKnown RBP25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 CNNM3Q8NE01 707 aa25.61■■□□□ 1.69
NKX2-1-201ENST00000354822 PTPREP23469 700 aa25.6■■□□□ 1.69
NKX2-1-201ENST00000354822 DYNLL1P63167 89 aaKnown RBP25.6■■□□□ 1.69
NKX2-1-201ENST00000354822 NBPF5PQ86XG9 351 aaPredicted RBP25.6■■□□□ 1.69
NKX2-1-201ENST00000354822 NSUN4Q96CB9 384 aaKnown RBP25.6■■□□□ 1.69
NKX2-1-201ENST00000354822 MORC2Q9Y6X9 1032 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms