RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TYRO3Q06418 890 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 LEO1Q8WVC0 666 aaPredicted RBP14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 CNKSR1Q969H4 720 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 ZBTB21Q9ULJ3 1066 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 DYNC1I1O14576 645 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 PNMA1Q8ND90 353 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 HOMER2Q9NSB8 354 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 MAPK8IP1Q9UQF2 711 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 BTBD18B2RXH4 712 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 BBOX1O75936 387 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 CALML3P27482 149 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 TMC6Q7Z403 805 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 PDCL2Q8N4E4 241 aa14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 GPKOWQ92917 476 aaPredicted RBP eCLIP14.1□□□□□ -0.15
PCDHB11-201ENST00000354757 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 TRIM28Q13263 835 aaKnown RBP14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 TCERG1LQ5VWI1 586 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 ANO1Q5XXA6 986 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 PTF1AQ7RTS3 328 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 FANCBQ8NB91 859 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 SEPT11Q9NVA2 429 aaKnown RBP14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 ZNHIT6Q9NWK9 470 aaKnown RBP14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 ZSWIM5Q9P217 1185 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 LEMD3Q9Y2U8 911 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 SPICE1Q8N0Z3 855 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 LMBRD1Q9NUN5 540 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 CYP2D6P10635 497 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 RABL6Q3YEC7 729 aaPredicted RBP14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 ARHGAP27Q6ZUM4 889 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 BRAPQ7Z569 592 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 RBSNQ9H1K0 784 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 TMEM63CQ9P1W3 806 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 ATP10DQ9P241 1426 aa14.09□□□□□ -0.15
PCDHB11-201ENST00000354757 TNIP1Q15025 636 aa14.08□□□□□ -0.15
PCDHB11-201ENST00000354757 TSC1Q92574 1164 aa14.08□□□□□ -0.15
PCDHB11-201ENST00000354757 RIPOR2Q9Y4F9 1068 aa14.08□□□□□ -0.15
PCDHB11-201ENST00000354757 KDM6AO15550 1401 aaPredicted RBP14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 FAM196BA6NMK8 535 aa14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 CHRNA5P30532 468 aa14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 RRAGBQ5VZM2 374 aa14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 ZSCAN10Q96SZ4 725 aaPredicted RBP14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 ARPP21Q9UBL0 812 aaPredicted RBP14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 ASIC1P78348 528 aa14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 APOA5Q6Q788 366 aa14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 TTC12Q9H892 705 aaPredicted RBP14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 ERCC3P19447 782 aa14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 LLPHQ9BRT6 129 aaKnown RBP14.08□□□□□ -0.16
PCDHB11-201ENST00000354757 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 CBFA2T2O43439 604 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 GNA11P29992 359 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 SLC44A5Q8NCS7 719 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 STRBPQ96SI9 672 aaKnown RBP14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 CPDO75976 1380 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 UBN2Q6ZU65 1347 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 ARID4AP29374 1257 aaPredicted RBP14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 TXKP42681 527 aa14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 MTIF2P46199 727 aaKnown RBP14.07□□□□□ -0.16
PCDHB11-201ENST00000354757 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 DTHD1Q6ZMT9 781 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 ZNF34Q8IZ26 560 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 FAM200AQ8TCP9 573 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 TAF6LQ9Y6J9 622 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 POLR2DO15514 142 aaKnown RBP14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 PFKFB2O60825 505 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 DNA2P51530 1060 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 ZNF274Q96GC6 653 aaPredicted RBP14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 A0A087WWV3 80 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 CHMP2AO43633 222 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 C16orf45Q96MC5 204 aaPredicted RBP14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 SCLT1Q96NL6 688 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 CPVLQ9H3G5 476 aa14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 CGNQ9P2M7 1197 aaKnown RBP14.06□□□□□ -0.16
PCDHB11-201ENST00000354757 USP17L3A6NCW0 530 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 USP17L4A6NCW7 530 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 GDF11O95390 407 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 RAD51AP2Q09MP3 1159 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 USP17L1Q7RTZ2 530 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 SPATA31A6Q5VVP1 1343 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 KLRF2D3W0D1 207 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 CFBP00751 764 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 RILPL1Q5EBL4 403 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 MYSM1Q5VVJ2 828 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 CAGE1Q8TC20 777 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 RASGRP4Q8TDF6 673 aa14.05□□□□□ -0.16
PCDHB11-201ENST00000354757 FAM84BQ96KN1 310 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms