RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
CDRT1-202ENST00000354433 PIH1D3Q9NQM4 214 aaKnown RBP13.99□□□□□ -0.17
CDRT1-202ENST00000354433 NDUFB9Q9Y6M9 179 aa13.99□□□□□ -0.17
CDRT1-202ENST00000354433 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 CXCL11O14625 94 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 CTNND1O60716 968 aaKnown RBP13.98□□□□□ -0.17
CDRT1-202ENST00000354433 PTPRAP18433 802 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 CYP7A1P22680 504 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 GADL1Q6ZQY3 521 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 ADGRA1Q86SQ6 560 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 TGFBRAP1Q8WUH2 860 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
CDRT1-202ENST00000354433 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-202ENST00000354433 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 PTPN22Q9Y2R2 807 aa13.98□□□□□ -0.17
CDRT1-202ENST00000354433 FLT1P17948 1338 aa13.97□□□□□ -0.17
CDRT1-202ENST00000354433 COL2A1P02458 1487 aaPredicted RBP13.97□□□□□ -0.17
CDRT1-202ENST00000354433 IFIT2P09913 472 aaKnown RBP13.97□□□□□ -0.17
CDRT1-202ENST00000354433 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
CDRT1-202ENST00000354433 CCDC84Q86UT8 332 aaPredicted RBP13.97□□□□□ -0.17
CDRT1-202ENST00000354433 CRACR2BQ8N4Y2 399 aaPredicted RBP13.97□□□□□ -0.17
CDRT1-202ENST00000354433 MAGEB6Q8N7X4 407 aa13.97□□□□□ -0.17
CDRT1-202ENST00000354433 MIGA1Q8NAN2 632 aa13.97□□□□□ -0.17
CDRT1-202ENST00000354433 TBC1D12O60347 775 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 NUCB1Q02818 461 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 SLC4A8Q2Y0W8 1093 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 FASTKD5Q7L8L6 764 aaKnown RBP13.96□□□□□ -0.17
CDRT1-202ENST00000354433 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 SIRT2Q8IXJ6 389 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
CDRT1-202ENST00000354433 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.17
CDRT1-202ENST00000354433 ANTXR1Q9H6X2 564 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 PI4KBQ9UBF8 816 aa13.96□□□□□ -0.17
CDRT1-202ENST00000354433 A0A0G2JLL6 359 aaPredicted RBP13.96□□□□□ -0.18
CDRT1-202ENST00000354433 IGSF3O75054 1194 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 CYP2C8P10632 490 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 DYNLL1P63167 89 aaKnown RBP13.96□□□□□ -0.18
CDRT1-202ENST00000354433 LACTBP83111 547 aaPredicted RBP13.96□□□□□ -0.18
CDRT1-202ENST00000354433 CAP1Q01518 475 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 MAP3K10Q02779 954 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 PRRT2Q7Z6L0 340 aaPredicted RBP13.96□□□□□ -0.18
CDRT1-202ENST00000354433 ARHGAP39Q9C0H5 1083 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 DCTPP1Q9H773 170 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 HERC5Q9UII4 1024 aaKnown RBP13.96□□□□□ -0.18
CDRT1-202ENST00000354433 AFG3L2Q9Y4W6 797 aa13.96□□□□□ -0.18
CDRT1-202ENST00000354433 DOCK1Q14185 1865 aa13.95□□□□□ -0.18
CDRT1-202ENST00000354433 HLA-DOAP06340 250 aa13.95□□□□□ -0.18
CDRT1-202ENST00000354433 USP5P45974 858 aa13.95□□□□□ -0.18
CDRT1-202ENST00000354433 PPP4CP60510 307 aa13.95□□□□□ -0.18
CDRT1-202ENST00000354433 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
CDRT1-202ENST00000354433 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
CDRT1-202ENST00000354433 SAP30BPQ9UHR5 308 aaKnown RBP13.95□□□□□ -0.18
CDRT1-202ENST00000354433 PTCH2Q9Y6C5 1203 aa13.95□□□□□ -0.18
CDRT1-202ENST00000354433 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
CDRT1-202ENST00000354433 MOGSQ13724 837 aa13.94□□□□□ -0.18
CDRT1-202ENST00000354433 TTF1Q15361 905 aaPredicted RBP13.94□□□□□ -0.18
CDRT1-202ENST00000354433 C17orf99Q6UX52 265 aa13.94□□□□□ -0.18
CDRT1-202ENST00000354433 CERS3Q8IU89 383 aa13.94□□□□□ -0.18
CDRT1-202ENST00000354433 PALD1Q9ULE6 856 aa13.94□□□□□ -0.18
CDRT1-202ENST00000354433 GOLIM4O00461 696 aa13.93□□□□□ -0.18
CDRT1-202ENST00000354433 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
CDRT1-202ENST00000354433 CAP2P40123 477 aa13.93□□□□□ -0.18
CDRT1-202ENST00000354433 GPAT2Q6NUI2 795 aa13.93□□□□□ -0.18
CDRT1-202ENST00000354433 CHD1LQ86WJ1 897 aa13.93□□□□□ -0.18
CDRT1-202ENST00000354433 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
CDRT1-202ENST00000354433 MYCP01106 439 aaPredicted RBP13.92□□□□□ -0.18
CDRT1-202ENST00000354433 PSMC4P43686 418 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 SPP2Q13103 211 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 NBPF11Q86T75 865 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 ZNF280CQ8ND82 737 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 HTTP42858 3142 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 GDF11O95390 407 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 GNRH1P01148 92 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 HMGCS2P54868 508 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 SLC9C2Q5TAH2 1124 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 TBC1D2Q9BYX2 928 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 AGTPBP1Q9UPW5 1226 aa13.92□□□□□ -0.18
CDRT1-202ENST00000354433 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 CENPFP49454 3210 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 ASNSP08243 561 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 HOXD10P28358 340 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 RRP1BQ14684 758 aaKnown RBP13.91□□□□□ -0.18
CDRT1-202ENST00000354433 TREML2Q5T2D2 321 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 FOXP4Q8IVH2 680 aaPredicted RBP13.91□□□□□ -0.18
CDRT1-202ENST00000354433 RAET1EQ8TD07 263 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDRT1-202ENST00000354433 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 DNAJC18Q9H819 358 aa13.91□□□□□ -0.18
CDRT1-202ENST00000354433 ZSWIM8A7E2V4 1837 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 MAGEB6P1A0A0J9YX57 407 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 POTEFA5A3E0 1075 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 PDE6AP16499 860 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 FCGRTP55899 365 aa13.9□□□□□ -0.18
CDRT1-202ENST00000354433 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms