RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ZSCAN10Q96SZ4 725 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNF38-203ENST00000353739 DNAJC25Q9H1X3 360 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 TOMM22Q9NS69 142 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 RTCBQ9Y3I0 505 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 GOLGA6L9A6NEM1 432 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 GSG1L2A8MUP6 293 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 FGRP09769 529 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 CALML3P27482 149 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ST5P78524 1137 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 NBPF5PQ86XG9 351 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 CTCFLQ8NI51 663 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 CCDC12Q8WUD4 166 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 BTAF1O14981 1849 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 GOLGB1Q14789 3259 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 hCG_1984214I3L0E3 225 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 NPHP1O15259 732 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 FOXP2O15409 715 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ADAMTS2O95450 1211 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 HIBADHP31937 336 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 GTF2F1P35269 517 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNF38-203ENST00000353739 CEBPZQ03701 1054 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 ORC2Q13416 577 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 FCHSD1Q86WN1 690 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 MICU3Q86XE3 530 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ZNF713Q8N859 430 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 CCDC148Q8NFR7 591 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 CHAMP1Q96JM3 812 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 GOLPH3LQ9H4A5 285 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 CCDC88AQ3V6T2 1871 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ZNF202O95125 648 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 PFKFB1P16118 471 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 TXLNAP40222 546 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 FOSBP53539 338 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ITPK1Q13572 414 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ERFEQ4G0M1 354 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 FBXO33Q7Z6M2 555 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 LUZP1Q86V48 1076 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ZNF654Q8IZM8 581 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 LCORLQ8N3X6 602 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ACSBG1Q96GR2 724 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 RBM17Q96I25 401 aaKnown RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 EPB41L4AQ9HCS5 686 aaPredicted RBP4.28□□□□□ -1.72
RNF38-203ENST00000353739 RMND1Q9NWS8 449 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 CLIC4Q9Y696 253 aa4.28□□□□□ -1.72
RNF38-203ENST00000353739 ROBO3Q96MS0 1386 aa4.28□□□□□ -1.73
RNF38-203ENST00000353739 HSP90AA2PQ14568 343 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 CHST3Q7LGC8 479 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 MLKLQ8NB16 471 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 CNNM3Q8NE01 707 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 NBPF3Q9H094 633 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 PDCL3Q9H2J4 239 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 NAV1Q8NEY1 1877 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 LAD1O00515 517 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 PPP1R2P41236 205 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 CTDSPL2Q05D32 466 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 IQCB1Q15051 598 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 ILDR1Q86SU0 546 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 DZIP1Q86YF9 867 aaKnown RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 DHX40Q8IX18 779 aaKnown RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 CRACR2BQ8N4Y2 399 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 FANCBQ8NB91 859 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 LINC00116Q8NCU8 138 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 KIAA1524Q8TCG1 905 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 SMARCE1Q969G3 411 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 CCDC47Q96A33 483 aaKnown RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 CTAGE1Q96RT6 745 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 MAGEF1Q9HAY2 307 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 TCP11L1Q9NUJ3 509 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 TUBE1Q9UJT0 475 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 HPSEQ9Y251 543 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 C10orf71Q711Q0 1435 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 XDHP47989 1333 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 MYL1P05976 194 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 ATP2B4P23634 1241 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 BCAMP50895 628 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 NDUFA8P51970 172 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 RPS8P62241 208 aaKnown RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 MYL5Q02045 173 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 GUCY1B3Q02153 619 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 RRP12Q5JTH9 1297 aaKnown RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 KRBA2Q6ZNG9 492 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 PDCL2Q8N4E4 241 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 ANKRD20A12PQ8NF67 263 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 OSBPL5Q9H0X9 879 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 MINPP1Q9UNW1 487 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 TRIM75PA6NK02 468 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 NUTM2BA6NNL0 878 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 NUTM2EB1AL46 878 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 POLR3DP05423 398 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 TPM1P09493 284 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 GRAPQ13588 217 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 NTRK3Q16288 839 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 TPD52L1Q16890 204 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 SLC27A3Q5K4L6 730 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 FAM173BQ6P4H8 233 aa4.27□□□□□ -1.73
RNF38-203ENST00000353739 NUTM2AQ8IVF1 878 aaPredicted RBP4.27□□□□□ -1.73
RNF38-203ENST00000353739 AOPEPQ8N6M6 819 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms