RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CCDC114Q96M63 670 aa14.97□□□□□ -0.01
IFT88-202ENST00000351808 TTF2Q9UNY4 1162 aaKnown RBP14.97□□□□□ -0.01
IFT88-202ENST00000351808 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 GOLGA8KD6RF30 607 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 FDPSP14324 419 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 USPL1Q5W0Q7 1092 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 CYB5D1Q6P9G0 228 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 SND1Q7KZF4 910 aaKnown RBP eCLIP14.96□□□□□ -0.01
IFT88-202ENST00000351808 METTL16Q86W50 562 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 MICAL1Q8TDZ2 1067 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 ITFG2Q969R8 447 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 ZBTB10Q96DT7 871 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 RRP36Q96EU6 259 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 BSDC1Q9NW68 430 aaPredicted RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 IRAK4Q9NWZ3 460 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 CPSF2Q9P2I0 782 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 TPX2Q9ULW0 747 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 SALL1Q9NSC2 1324 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 SKOR1P84550 965 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 ANO1Q5XXA6 986 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 CCDC129Q6ZRS4 1044 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 STOX1Q6ZVD7 989 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 SH2D3CQ8N5H7 860 aa14.96□□□□□ -0.01
IFT88-202ENST00000351808 THOC1Q96FV9 657 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 NAA15Q9BXJ9 866 aaKnown RBP14.96□□□□□ -0.01
IFT88-202ENST00000351808 FOXN1O15353 648 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
IFT88-202ENST00000351808 TTMPQ5BVD1 217 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 ATP6V0A4Q9HBG4 840 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 ENO4A6NNW6 628 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 CAND2O75155 1236 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 CHGBP05060 677 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 SNX1Q13596 522 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 IDI1Q13907 227 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 KCTD16Q68DU8 428 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 FUKQ8N0W3 1084 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 EAF2Q96CJ1 260 aaPredicted RBP14.95□□□□□ -0.02
IFT88-202ENST00000351808 TLR7Q9NYK1 1049 aaKnown RBP14.95□□□□□ -0.02
IFT88-202ENST00000351808 COL15A1P39059 1388 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
IFT88-202ENST00000351808 ZNF827Q17R98 1081 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 TRAPPC11Q7Z392 1133 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 ZNF473Q8WTR7 871 aaKnown RBP14.95□□□□□ -0.02
IFT88-202ENST00000351808 TRIM10Q9UDY6 481 aa14.95□□□□□ -0.02
IFT88-202ENST00000351808 CASP14P31944 242 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 LSP1P33241 339 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 RBM5P52756 815 aaKnown RBP eCLIP14.94□□□□□ -0.02
IFT88-202ENST00000351808 SEC24CP53992 1094 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 KCNB1Q14721 858 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 PLCB4Q15147 1175 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 ZC3H12AQ5D1E8 599 aaKnown RBP14.94□□□□□ -0.02
IFT88-202ENST00000351808 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 GUCA1BQ9UMX6 200 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 ATP7AQ04656 1500 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 GUCY1A3Q02108 690 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 TAF7Q15545 349 aaPredicted RBP14.94□□□□□ -0.02
IFT88-202ENST00000351808 MTHFSDQ2M296 383 aaKnown RBP14.94□□□□□ -0.02
IFT88-202ENST00000351808 ACCSLQ4AC99 568 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 CHST3Q7LGC8 479 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 TICAM2Q86XR7 235 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 PTPRMP28827 1452 aa14.94□□□□□ -0.02
IFT88-202ENST00000351808 OPA1O60313 960 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 RWDD2BP57060 319 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 HDLBPQ00341 1268 aaKnown RBP14.93□□□□□ -0.02
IFT88-202ENST00000351808 DHX32Q7L7V1 743 aaKnown RBP14.93□□□□□ -0.02
IFT88-202ENST00000351808 LMBR1Q8WVP7 490 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 C8orf76Q96K31 380 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 SLF1Q9BQI6 1058 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 EPN3Q9H201 632 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 FAM184BQ9ULE4 1060 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.93□□□□□ -0.02
IFT88-202ENST00000351808 KIF28PB7ZC32 967 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 MFAP3LO75121 409 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 PDIA3P30101 505 aaKnown RBP14.93□□□□□ -0.02
IFT88-202ENST00000351808 ICA1Q05084 483 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 NEXMIFQ5QGS0 1516 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 NBPF14Q5TI25 921 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 NBPF5PQ86XG9 351 aaPredicted RBP14.93□□□□□ -0.02
IFT88-202ENST00000351808 AENQ8WTP8 325 aaKnown RBP14.93□□□□□ -0.02
IFT88-202ENST00000351808 MED15Q96RN5 788 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 TAOK2Q9UL54 1235 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 HPSEQ9Y251 543 aa14.93□□□□□ -0.02
IFT88-202ENST00000351808 NPATQ14207 1427 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 A0A1B0GTH6 734 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 TULP1O00294 542 aaPredicted RBP14.92□□□□□ -0.02
IFT88-202ENST00000351808 ATP1A1P05023 1023 aaKnown RBP14.92□□□□□ -0.02
IFT88-202ENST00000351808 SLC8A3P57103 927 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
IFT88-202ENST00000351808 RNPC3Q96LT9 517 aaKnown RBP14.92□□□□□ -0.02
IFT88-202ENST00000351808 CCT8L2Q96SF2 557 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 MYO1AQ9UBC5 1043 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 JCADQ9P266 1359 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 A6NNZ2 444 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 FXR1P51114 621 aaKnown RBP eCLIP14.92□□□□□ -0.02
IFT88-202ENST00000351808 ERVK-24P63145 666 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 SPRED3Q2MJR0 410 aa14.92□□□□□ -0.02
IFT88-202ENST00000351808 TUBB8Q3ZCM7 444 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms