RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 DMTNQ08495 405 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 RSPH3Q86UC2 560 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 ATCAYQ86WG3 371 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 SLFN12Q8IYM2 578 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 CRELD1Q96HD1 420 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 NCAPGQ9BPX3 1015 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 UBA5Q9GZZ9 404 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 SEPSECSQ9HD40 501 aaKnown RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 PRKAB1Q9Y478 270 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 PRDM2Q13029 1718 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 COL17A1Q9UMD9 1497 aaPredicted RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 GOLGA8BA8MQT2 603 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 BAG4O95429 457 aaKnown RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 ALDH1A1P00352 501 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 NF2P35240 595 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 TIE1P35590 1138 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 TPD52P55327 224 aaPredicted RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 ZNF445P59923 1031 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 SCARF1Q14162 830 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 NBPF9Q3BBW0 867 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 TSHZ1Q6ZSZ6 1077 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 TEX11Q8IYF3 940 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 MUL1Q969V5 352 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 REPIN1Q9BWE0 567 aaKnown RBP6.8□□□□□ -1.32
RFC1-201ENST00000349703 LACRTQ9GZZ8 138 aa6.8□□□□□ -1.32
RFC1-201ENST00000349703 SRGAP2CP0DJJ0 459 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 MTHFSP49914 203 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 GFOD2Q3B7J2 385 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 ZSCAN23Q3MJ62 389 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 CCDC92Q53HC0 331 aaPredicted RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 CCDC47Q96A33 483 aaKnown RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 VEZTQ9HBM0 779 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 ZNHIT6Q9NWK9 470 aaKnown RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 TTLL3Q9Y4R7 772 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 MBD5Q9P267 1494 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 KANK1Q14678 1352 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 KRT15P19012 456 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 USP11P51784 963 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 RARSP54136 660 aaKnown RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 FAM180AQ6UWF9 173 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 HLA-CQ95604 372 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 FRMD6Q96NE9 622 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 TTC1Q99614 292 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 ALG1Q9BT22 464 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 HMX1Q9NP08 348 aaPredicted RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 CALCOCO1Q9P1Z2 691 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 C9orf84Q5VXU9 1444 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 ITSN2Q9NZM3 1697 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 GOLGA8AA7E2F4 631 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 GSTT1P30711 240 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 ZNF131P52739 623 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 GPS2Q13227 327 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 GRAMD1CQ8IYS0 662 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 MYRIPQ8NFW9 859 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 SELENOOQ9BVL4 669 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 TROQ12816 1431 aaPredicted RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 CDC14CA4D256 554 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 CBX1P83916 185 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 HDLBPQ00341 1268 aaKnown RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 OCRLQ01968 901 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 STARD3Q14849 445 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 GADL1Q6ZQY3 521 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 CCDC117Q8IWD4 279 aaPredicted RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 CXorf38Q8TB03 319 aa6.79□□□□□ -1.32
RFC1-201ENST00000349703 CGNQ9P2M7 1197 aaKnown RBP6.79□□□□□ -1.32
RFC1-201ENST00000349703 RARAP10276 462 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 PRKG1Q13976 671 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 JAMLQ86YT9 394 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 OXCT2Q9BYC2 517 aaPredicted RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 ARHGEF3Q9NR81 526 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 PLEKHH1Q9ULM0 1364 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 ZNF644Q9H582 1327 aaPredicted RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 PZPP20742 1482 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 GOLIM4O00461 696 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 ZEB2O60315 1214 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 HSD3B2P26439 372 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 ABCD1P33897 745 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 TRIM32Q13049 653 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 LRRC14Q15048 493 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 COBLL1Q53SF7 1204 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 ZSWIM2Q8NEG5 633 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 FBXO22Q8NEZ5 403 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 SAMD9Q5K651 1589 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 SBNO2Q9Y2G9 1366 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 ASXL1Q8IXJ9 1541 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 FXR2P51116 673 aaKnown RBP eCLIP6.78□□□□□ -1.322e-6■■■□□ 18.9
RFC1-201ENST00000349703 TAGLNQ01995 201 aaKnown RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 SLC44A4Q53GD3 710 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 CHD1LQ86WJ1 897 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 KSR1Q8IVT5 923 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 CWC15Q9P013 229 aaKnown RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 AP4E1Q9UPM8 1137 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 FRMPD2Q68DX3 1309 aaPredicted RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 LSM1O15116 133 aaKnown RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 STARD3NLO95772 234 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 P4HBP07237 508 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms