RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TESPA1A2RU30 521 aaPredicted RBP26.7■■□□□ 1.86
SNX3-202ENST00000349379 INHBEP58166 350 aa26.7■■□□□ 1.86
SNX3-202ENST00000349379 B4GALNT3Q6L9W6 998 aa26.7■■□□□ 1.86
SNX3-202ENST00000349379 MS4A4AQ96JQ5 239 aa26.7■■□□□ 1.86
SNX3-202ENST00000349379 PRDM10Q9NQV6 1147 aa26.7■■□□□ 1.86
SNX3-202ENST00000349379 HERC5Q9UII4 1024 aaKnown RBP26.7■■□□□ 1.86
SNX3-202ENST00000349379 PALD1Q9ULE6 856 aa26.7■■□□□ 1.86
SNX3-202ENST00000349379 USP5P45974 858 aa26.69■■□□□ 1.86
SNX3-202ENST00000349379 OTUD5Q96G74 571 aa26.69■■□□□ 1.86
SNX3-202ENST00000349379 CRNKL1Q9BZJ0 848 aaKnown RBP26.69■■□□□ 1.86
SNX3-202ENST00000349379 MYH8P13535 1937 aa26.69■■□□□ 1.86
SNX3-202ENST00000349379 CTNND1O60716 968 aaKnown RBP26.68■■□□□ 1.86
SNX3-202ENST00000349379 LBX1P52954 281 aa26.68■■□□□ 1.86
SNX3-202ENST00000349379 PPATQ06203 517 aa26.68■■□□□ 1.86
SNX3-202ENST00000349379 PPIL2Q13356 520 aa26.68■■□□□ 1.86
SNX3-202ENST00000349379 SCYL3Q8IZE3 742 aa26.68■■□□□ 1.86
SNX3-202ENST00000349379 DNAJC18Q9H819 358 aa26.68■■□□□ 1.86
SNX3-202ENST00000349379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.68■■□□□ 1.86
SNX3-202ENST00000349379 TSKSQ9UJT2 592 aa26.68■■□□□ 1.86
SNX3-202ENST00000349379 FAM196BA6NMK8 535 aa26.67■■□□□ 1.86
SNX3-202ENST00000349379 ZFYP08048 801 aaPredicted RBP26.67■■□□□ 1.86
SNX3-202ENST00000349379 FOXP4Q8IVH2 680 aaPredicted RBP26.67■■□□□ 1.86
SNX3-202ENST00000349379 PUS7LQ9H0K6 701 aaKnown RBP26.67■■□□□ 1.86
SNX3-202ENST00000349379 ARMT1Q9H993 441 aa26.67■■□□□ 1.86
SNX3-202ENST00000349379 SAP30BPQ9UHR5 308 aaKnown RBP26.67■■□□□ 1.86
SNX3-202ENST00000349379 IRF6O14896 467 aa26.66■■□□□ 1.86
SNX3-202ENST00000349379 TRPA1O75762 1119 aa26.66■■□□□ 1.86
SNX3-202ENST00000349379 MBD4O95243 580 aa26.66■■□□□ 1.86
SNX3-202ENST00000349379 CFHR5Q9BXR6 569 aa26.66■■□□□ 1.86
SNX3-202ENST00000349379 IGF2BP3O00425 579 aaKnown RBP eCLIP26.65■■□□□ 1.86
SNX3-202ENST00000349379 RNF113AO15541 343 aaKnown RBP26.65■■□□□ 1.86
SNX3-202ENST00000349379 GTF2A2P52657 109 aa26.65■■□□□ 1.86
SNX3-202ENST00000349379 IFNL1Q8IU54 200 aa26.65■■□□□ 1.86
SNX3-202ENST00000349379 APPBP2Q92624 585 aa26.65■■□□□ 1.86
SNX3-202ENST00000349379 PTPN18Q99952 460 aa26.65■■□□□ 1.86
SNX3-202ENST00000349379 EHD4Q9H223 541 aa26.65■■□□□ 1.86
SNX3-202ENST00000349379 OSBPL3Q9H4L5 887 aa26.65■■□□□ 1.86
SNX3-202ENST00000349379 DCP1AQ9NPI6 582 aaPredicted RBP26.65■■□□□ 1.86
SNX3-202ENST00000349379 HLA-DOAP06340 250 aa26.64■■□□□ 1.86
SNX3-202ENST00000349379 RRP1BQ14684 758 aaKnown RBP26.64■■□□□ 1.86
SNX3-202ENST00000349379 PLEKHM2Q8IWE5 1019 aa26.64■■□□□ 1.86
SNX3-202ENST00000349379 SDR42E1Q8WUS8 393 aa26.64■■□□□ 1.86
SNX3-202ENST00000349379 KCNH4Q9UQ05 1017 aa26.64■■□□□ 1.86
SNX3-202ENST00000349379 PTPRAP18433 802 aa26.63■■□□□ 1.85
SNX3-202ENST00000349379 BRI3BPQ8WY22 251 aa26.63■■□□□ 1.85
SNX3-202ENST00000349379 OSBP2Q969R2 916 aa26.63■■□□□ 1.85
SNX3-202ENST00000349379 ATP8A2Q9NTI2 1148 aa26.63■■□□□ 1.85
SNX3-202ENST00000349379 PRKAB2O43741 272 aa26.62■■□□□ 1.85
SNX3-202ENST00000349379 ALDH1A1P00352 501 aa26.62■■□□□ 1.85
SNX3-202ENST00000349379 CAP2P40123 477 aa26.62■■□□□ 1.85
SNX3-202ENST00000349379 LRRFIP1Q32MZ4 808 aaKnown RBP26.62■■□□□ 1.85
SNX3-202ENST00000349379 COL13A1Q5TAT6 717 aaPredicted RBP26.62■■□□□ 1.85
SNX3-202ENST00000349379 TTC6Q86TZ1 520 aa26.62■■□□□ 1.85
SNX3-202ENST00000349379 PICK1Q9NRD5 415 aa26.62■■□□□ 1.85
SNX3-202ENST00000349379 CCL15-CCL14A0A0B4J2E2 113 aa26.61■■□□□ 1.85
SNX3-202ENST00000349379 SNAPC2Q13487 334 aa26.61■■□□□ 1.85
SNX3-202ENST00000349379 CCL15Q16663 113 aa26.61■■□□□ 1.85
SNX3-202ENST00000349379 EVI5LQ96CN4 794 aa26.61■■□□□ 1.85
SNX3-202ENST00000349379 STRBPQ96SI9 672 aaKnown RBP26.61■■□□□ 1.85
SNX3-202ENST00000349379 FSD1Q9BTV5 496 aa26.61■■□□□ 1.85
SNX3-202ENST00000349379 LOC285556D6RIA3 1793 aa26.61■■□□□ 1.85
SNX3-202ENST00000349379 PLCD1P51178 756 aa26.6■■□□□ 1.85
SNX3-202ENST00000349379 GABPAQ06546 454 aa26.6■■□□□ 1.85
SNX3-202ENST00000349379 SLC4A8Q2Y0W8 1093 aa26.6■■□□□ 1.85
SNX3-202ENST00000349379 CRACR2BQ8N4Y2 399 aaPredicted RBP26.6■■□□□ 1.85
SNX3-202ENST00000349379 MCM9Q9NXL9 1143 aa26.6■■□□□ 1.85
SNX3-202ENST00000349379 SERPINB13Q9UIV8 391 aa26.6■■□□□ 1.85
SNX3-202ENST00000349379 CETPP11597 493 aa26.59■■□□□ 1.85
SNX3-202ENST00000349379 NOM1Q5C9Z4 860 aaKnown RBP26.59■■□□□ 1.85
SNX3-202ENST00000349379 TATDN1Q6P1N9 297 aa26.59■■□□□ 1.85
SNX3-202ENST00000349379 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.59■■□□□ 1.85
SNX3-202ENST00000349379 AFG3L2Q9Y4W6 797 aa26.59■■□□□ 1.85
SNX3-202ENST00000349379 CXCL11O14625 94 aa26.58■■□□□ 1.85
SNX3-202ENST00000349379 MOGSQ13724 837 aa26.58■■□□□ 1.85
SNX3-202ENST00000349379 ZMYM1Q5SVZ6 1142 aa26.58■■□□□ 1.85
SNX3-202ENST00000349379 TICAM2Q86XR7 235 aa26.58■■□□□ 1.85
SNX3-202ENST00000349379 SLC4A4Q9Y6R1 1079 aa26.58■■□□□ 1.85
SNX3-202ENST00000349379 ZHX2Q9Y6X8 837 aa26.58■■□□□ 1.85
SNX3-202ENST00000349379 M0R2C6 588 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 GPAA1O43292 621 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 TBC1D8O95759 1140 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 POLR3DP05423 398 aaPredicted RBP26.57■■□□□ 1.84
SNX3-202ENST00000349379 EVX2Q03828 476 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 OTUD7BQ6GQQ9 843 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 TRIM34Q9BYJ4 488 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 ZCCHC17Q9NP64 241 aaKnown RBP26.57■■□□□ 1.84
SNX3-202ENST00000349379 GINM1Q9NU53 330 aa26.57■■□□□ 1.84
SNX3-202ENST00000349379 PDE4AP27815 886 aa26.56■■□□□ 1.84
SNX3-202ENST00000349379 JAG1P78504 1218 aa26.56■■□□□ 1.84
SNX3-202ENST00000349379 FAM43AQ8N2R8 423 aa26.56■■□□□ 1.84
SNX3-202ENST00000349379 TBC1D2Q9BYX2 928 aa26.56■■□□□ 1.84
SNX3-202ENST00000349379 R3HDMLQ9H3Y0 253 aa26.56■■□□□ 1.84
SNX3-202ENST00000349379 TAOK2Q9UL54 1235 aa26.56■■□□□ 1.84
SNX3-202ENST00000349379 A0A0G2JLL6 359 aaPredicted RBP26.55■■□□□ 1.84
SNX3-202ENST00000349379 CYP2D6P10635 497 aa26.55■■□□□ 1.84
SNX3-202ENST00000349379 PRRT2Q7Z6L0 340 aaPredicted RBP26.55■■□□□ 1.84
SNX3-202ENST00000349379 CCDC84Q86UT8 332 aaPredicted RBP26.55■■□□□ 1.84
SNX3-202ENST00000349379 SEC62Q99442 399 aaKnown RBP26.55■■□□□ 1.84
SNX3-202ENST00000349379 GSG1L2A8MUP6 293 aa26.54■■□□□ 1.84
SNX3-202ENST00000349379 BTBD19C9JJ37 291 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms