RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 TNFAIP1Q13829 316 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 ANGEL2Q5VTE6 544 aaKnown RBP32.06■■■□□ 2.72
SSBP4-202ENST00000348495 USP50Q70EL3 339 aaPredicted RBP32.06■■■□□ 2.72
SSBP4-202ENST00000348495 RUFY3Q7L099 469 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 MB21D2Q8IYB1 491 aaPredicted RBP32.06■■■□□ 2.72
SSBP4-202ENST00000348495 NKX2-3Q8TAU0 364 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 EHD4Q9H223 541 aa32.06■■■□□ 2.72
SSBP4-202ENST00000348495 HLA-DOAP06340 250 aa32.05■■■□□ 2.72
SSBP4-202ENST00000348495 HMGB1P09429 215 aaKnown RBP32.05■■■□□ 2.72
SSBP4-202ENST00000348495 BLOC1S2Q6QNY1 142 aa32.05■■■□□ 2.72
SSBP4-202ENST00000348495 C16orf86Q6ZW13 317 aa32.05■■■□□ 2.72
SSBP4-202ENST00000348495 STK11IPQ8N1F8 1099 aa32.05■■■□□ 2.72
SSBP4-202ENST00000348495 TAF1DQ9H5J8 278 aaPredicted RBP32.05■■■□□ 2.72
SSBP4-202ENST00000348495 CNNM2Q9H8M5 875 aa32.05■■■□□ 2.72
SSBP4-202ENST00000348495 ORC4O43929 436 aa32.04■■■□□ 2.72
SSBP4-202ENST00000348495 CPA1P15085 419 aa32.04■■■□□ 2.72
SSBP4-202ENST00000348495 TNNI2P48788 182 aa32.04■■■□□ 2.72
SSBP4-202ENST00000348495 IL27Q8NEV9 243 aa32.04■■■□□ 2.72
SSBP4-202ENST00000348495 PI4KBQ9UBF8 816 aa32.04■■■□□ 2.72
SSBP4-202ENST00000348495 CYP46A1Q9Y6A2 500 aa32.04■■■□□ 2.72
SSBP4-202ENST00000348495 PITPNM2Q9BZ72 1349 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 RPS6KB1P23443 525 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 NEK4P51957 841 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 TRDNQ13061 729 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 APOBEC3FQ8IUX4 373 aaKnown RBP32.03■■■□□ 2.72
SSBP4-202ENST00000348495 KRT23Q9C075 422 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 TMEM39BQ9GZU3 492 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 GGA3Q9NZ52 723 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 SERPINB13Q9UIV8 391 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 PDE4BQ07343 736 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 RASA3Q14644 834 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 METTL16Q86W50 562 aaKnown RBP32.03■■■□□ 2.72
SSBP4-202ENST00000348495 ZSCAN29Q8IWY8 852 aaPredicted RBP32.03■■■□□ 2.72
SSBP4-202ENST00000348495 TAOK2Q9UL54 1235 aa32.03■■■□□ 2.72
SSBP4-202ENST00000348495 B4E1Z4 1266 aa32.02■■■□□ 2.72
SSBP4-202ENST00000348495 EXOSC10Q01780 885 aaKnown RBP32.02■■■□□ 2.72
SSBP4-202ENST00000348495 DHX32Q7L7V1 743 aaKnown RBP32.02■■■□□ 2.72
SSBP4-202ENST00000348495 RALYLQ86SE5 291 aaKnown RBP32.02■■■□□ 2.72
SSBP4-202ENST00000348495 SLC44A5Q8NCS7 719 aa32.02■■■□□ 2.72
SSBP4-202ENST00000348495 TTC14Q96N46 770 aa32.02■■■□□ 2.72
SSBP4-202ENST00000348495 TEPSINQ96N21 525 aa32.01■■■□□ 2.72
SSBP4-202ENST00000348495 SCAF8Q9UPN6 1271 aaKnown RBP32.01■■■□□ 2.72
SSBP4-202ENST00000348495 PRDM1O75626 825 aa32■■■□□ 2.71
SSBP4-202ENST00000348495 CDK8P49336 464 aa32■■■□□ 2.71
SSBP4-202ENST00000348495 CSRNP1Q96S65 589 aa32■■■□□ 2.71
SSBP4-202ENST00000348495 DEFB129Q9H1M3 183 aa32■■■□□ 2.71
SSBP4-202ENST00000348495 FOXP4Q8IVH2 680 aaPredicted RBP32■■■□□ 2.71
SSBP4-202ENST00000348495 CDAN1Q8IWY9 1227 aa32■■■□□ 2.71
SSBP4-202ENST00000348495 ZC3H15Q8WU90 426 aaKnown RBP32■■■□□ 2.71
SSBP4-202ENST00000348495 NT5C2P49902 561 aa31.99■■■□□ 2.71
SSBP4-202ENST00000348495 ANTXR2P58335 489 aa31.99■■■□□ 2.71
SSBP4-202ENST00000348495 DNAJC18Q9H819 358 aa31.99■■■□□ 2.71
SSBP4-202ENST00000348495 ZNF287Q9HBT7 754 aa31.99■■■□□ 2.71
SSBP4-202ENST00000348495 WDR19Q8NEZ3 1342 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 KDM4AO75164 1064 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 MCM5P33992 734 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 RRP12Q5JTH9 1297 aaKnown RBP31.98■■■□□ 2.71
SSBP4-202ENST00000348495 CYB5R4Q7L1T6 521 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 ESR2Q92731 530 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 ZSWIM5Q9P217 1185 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 SWAP70Q9UH65 585 aa31.98■■■□□ 2.71
SSBP4-202ENST00000348495 ALDH8A1Q9H2A2 487 aaPredicted RBP31.97■■■□□ 2.71
SSBP4-202ENST00000348495 TOMM22Q9NS69 142 aa31.97■■■□□ 2.71
SSBP4-202ENST00000348495 PDRG1Q9NUG6 133 aa31.97■■■□□ 2.71
SSBP4-202ENST00000348495 CD2BP2O95400 341 aaKnown RBP31.97■■■□□ 2.71
SSBP4-202ENST00000348495 PNMA8AQ86V59 439 aaPredicted RBP31.97■■■□□ 2.71
SSBP4-202ENST00000348495 TCEANC2Q96MN5 208 aa31.97■■■□□ 2.71
SSBP4-202ENST00000348495 ST18O60284 1047 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 SLURP2P0DP57 97 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 RASA1P20936 1047 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 SHMT1P34896 483 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 ANP32AP39687 249 aaKnown RBP31.96■■■□□ 2.71
SSBP4-202ENST00000348495 SNX21Q969T3 373 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 MKNK2Q9HBH9 465 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 PPP2R3BQ9Y5P8 575 aa31.96■■■□□ 2.71
SSBP4-202ENST00000348495 CHST3Q7LGC8 479 aa31.95■■■□□ 2.71
SSBP4-202ENST00000348495 FBXL16Q8N461 479 aa31.95■■■□□ 2.71
SSBP4-202ENST00000348495 HERC5Q9UII4 1024 aaKnown RBP31.95■■■□□ 2.71
SSBP4-202ENST00000348495 POLR2AP24928 1970 aaKnown RBP31.95■■■□□ 2.7
SSBP4-202ENST00000348495 PRC1O43663 620 aa31.95■■■□□ 2.7
SSBP4-202ENST00000348495 MAP3K10Q02779 954 aa31.95■■■□□ 2.7
SSBP4-202ENST00000348495 CRACR2BQ8N4Y2 399 aaPredicted RBP31.95■■■□□ 2.7
SSBP4-202ENST00000348495 TBC1D12O60347 775 aa31.94■■■□□ 2.7
SSBP4-202ENST00000348495 RANBP6O60518 1105 aaKnown RBP31.94■■■□□ 2.7
SSBP4-202ENST00000348495 VEGFAP15692 232 aaPredicted RBP31.94■■■□□ 2.7
SSBP4-202ENST00000348495 AGXT2Q9BYV1 514 aa31.94■■■□□ 2.7
SSBP4-202ENST00000348495 RRAGCQ9HB90 399 aa31.94■■■□□ 2.7
SSBP4-202ENST00000348495 TATDN1Q6P1N9 297 aa31.93■■■□□ 2.7
SSBP4-202ENST00000348495 DCPSQ96C86 337 aaKnown RBP31.93■■■□□ 2.7
SSBP4-202ENST00000348495 FAM196BA6NMK8 535 aa31.92■■■□□ 2.7
SSBP4-202ENST00000348495 AK2P54819 239 aa31.92■■■□□ 2.7
SSBP4-202ENST00000348495 MTA3Q9BTC8 594 aa31.92■■■□□ 2.7
SSBP4-202ENST00000348495 ZNF444Q8N0Y2 327 aaPredicted RBP31.92■■■□□ 2.7
SSBP4-202ENST00000348495 LRRC2Q9BYS8 371 aa31.92■■■□□ 2.7
SSBP4-202ENST00000348495 MYH8P13535 1937 aa31.91■■■□□ 2.7
SSBP4-202ENST00000348495 TOB2Q14106 344 aaPredicted RBP31.91■■■□□ 2.7
SSBP4-202ENST00000348495 EAPPQ56P03 285 aaPredicted RBP31.91■■■□□ 2.7
SSBP4-202ENST00000348495 FAM47AQ5JRC9 791 aa31.91■■■□□ 2.7
SSBP4-202ENST00000348495 Q6ZUG5 572 aa31.91■■■□□ 2.7
SSBP4-202ENST00000348495 TFAP4Q01664 338 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms