RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MLKLQ8NB16 471 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 DACH1Q9UI36 760 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 FXR1P51114 621 aaKnown RBP eCLIP17.4■□□□□ 0.385e-7■■■■□ 19.8
LMNA-201ENST00000347559 GRIN1Q05586 938 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 TRDNQ13061 729 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 UBE3BQ7Z3V4 1068 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
LMNA-201ENST00000347559 ANKRD24Q8TF21 1146 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 TTF2Q9UNY4 1162 aaKnown RBP17.4■□□□□ 0.38
LMNA-201ENST00000347559 CAPN7Q9Y6W3 813 aa17.4■□□□□ 0.38
LMNA-201ENST00000347559 SHTN1A0MZ66 631 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 CDC25AP30304 524 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 CCT6AP40227 531 aaKnown RBP17.39■□□□□ 0.37
LMNA-201ENST00000347559 PIP4K2AP48426 406 aaPredicted RBP17.39■□□□□ 0.37
LMNA-201ENST00000347559 A0A1B0GTH6 734 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 M0R2C6 588 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 MFAP3LO75121 409 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 TUBBP07437 444 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 USP8P40818 1118 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 WDR93Q6P2C0 686 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 NAA15Q9BXJ9 866 aaKnown RBP17.39■□□□□ 0.37
LMNA-201ENST00000347559 CEMIPQ8WUJ3 1361 aa17.39■□□□□ 0.37
LMNA-201ENST00000347559 AARSP49588 968 aaKnown RBP eCLIP17.38■□□□□ 0.37
LMNA-201ENST00000347559 GNGT1P63211 74 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 SETQ01105 290 aaPredicted RBP17.38■□□□□ 0.37
LMNA-201ENST00000347559 GCKRQ14397 625 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 ZMYM1Q5SVZ6 1142 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 COG1Q8WTW3 980 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 USP14P54578 494 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 MMS19Q96T76 1030 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 KRI1Q8N9T8 703 aaKnown RBP17.38■□□□□ 0.37
LMNA-201ENST00000347559 VIPAS39Q9H9C1 493 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 COPRSQ9NQ92 184 aa17.38■□□□□ 0.37
LMNA-201ENST00000347559 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
LMNA-201ENST00000347559 FKBP4Q02790 459 aaKnown RBP eCLIP17.37■□□□□ 0.37
LMNA-201ENST00000347559 TRIM29Q14134 588 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 IMMTQ16891 758 aaKnown RBP17.37■□□□□ 0.37
LMNA-201ENST00000347559 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
LMNA-201ENST00000347559 CAPS2Q9BXY5 557 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 DONSONQ9NYP3 566 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 MYO1FO00160 1098 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 MYBL2P10244 700 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 CASP1P29466 404 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 AFMP43652 599 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 FILIP1LQ4L180 1135 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
LMNA-201ENST00000347559 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 MAP3K14Q99558 947 aa17.37■□□□□ 0.37
LMNA-201ENST00000347559 UTYO14607 1347 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 ERVK-24P63145 666 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 MICU3Q86XE3 530 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 FMN2Q9NZ56 1722 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 GOLGA6BA6NDN3 693 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 GYPCP04921 128 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 GBP6Q6ZN66 633 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 OSBP2Q969R2 916 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 SELENOOQ9BVL4 669 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 WWC3Q9ULE0 1092 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 ATP5J2-PTCD1G3V325 749 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
LMNA-201ENST00000347559 PTCD1O75127 700 aaKnown RBP17.36■□□□□ 0.37
LMNA-201ENST00000347559 MORC3Q14149 939 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 FKBP15Q5T1M5 1219 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 CNGA4Q8IV77 575 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
LMNA-201ENST00000347559 ARHGAP25P42331 645 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 PLCD1P51178 756 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 ANTXR2P58335 489 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
LMNA-201ENST00000347559 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 A1BGP04217 495 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
LMNA-201ENST00000347559 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.371e-9■□□□□ 10.9
LMNA-201ENST00000347559 COPS6Q7L5N1 327 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 NBPF3Q9H094 633 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
LMNA-201ENST00000347559 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
LMNA-201ENST00000347559 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 AGPSO00116 658 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 RFX5P48382 616 aaPredicted RBP17.34■□□□□ 0.37
LMNA-201ENST00000347559 MRPS25P82663 173 aaKnown RBP17.34■□□□□ 0.37
LMNA-201ENST00000347559 AMPD2Q01433 879 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 GIMAP7Q8NHV1 300 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 MYL10Q9BUA6 226 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 SETD1BQ9UPS6 1966 aaKnown RBP17.34■□□□□ 0.37
LMNA-201ENST00000347559 RNF225M0QZC1 329 aaPredicted RBP17.34■□□□□ 0.37
LMNA-201ENST00000347559 KIAA0754O94854 1291 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 FGAP02671 866 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 USP49Q70CQ1 688 aa17.34■□□□□ 0.37
LMNA-201ENST00000347559 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms