RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 GJB2P29033 226 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 PRELPP51888 382 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 PDE4BQ07343 736 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 NFKBIBQ15653 356 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 CLEC17AQ6ZS10 378 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 SMARCC2Q8TAQ2 1214 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 DYNLL2Q96FJ2 89 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
ECM1-201ENST00000346569 PRDM1O75626 825 aa12.9□□□□□ -0.34
ECM1-201ENST00000346569 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
ECM1-201ENST00000346569 GABPAQ06546 454 aa12.9□□□□□ -0.34
ECM1-201ENST00000346569 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
ECM1-201ENST00000346569 JDP2Q8WYK2 163 aa12.9□□□□□ -0.34
ECM1-201ENST00000346569 TNPO1Q92973 898 aaKnown RBP12.9□□□□□ -0.34
ECM1-201ENST00000346569 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
ECM1-201ENST00000346569 TOMM22Q9NS69 142 aa12.9□□□□□ -0.34
ECM1-201ENST00000346569 SAP30BPQ9UHR5 308 aaKnown RBP12.9□□□□□ -0.34
ECM1-201ENST00000346569 DTNBO60941 627 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 PDIA4P13667 645 aaKnown RBP12.89□□□□□ -0.35
ECM1-201ENST00000346569 SYT1P21579 422 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 CDK8P49336 464 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 AMOTL1Q8IY63 956 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 MTMR14Q8NCE2 650 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
ECM1-201ENST00000346569 ZSCAN10Q96SZ4 725 aaPredicted RBP12.89□□□□□ -0.35
ECM1-201ENST00000346569 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
ECM1-201ENST00000346569 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
ECM1-201ENST00000346569 PSME4Q14997 1843 aa12.89□□□□□ -0.35
ECM1-201ENST00000346569 FZD9O00144 591 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
ECM1-201ENST00000346569 MMP14P50281 582 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
ECM1-201ENST00000346569 NFIAQ12857 509 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 WTAPQ15007 396 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
ECM1-201ENST00000346569 TTC6Q86TZ1 520 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 ZBED3Q96IU2 234 aaPredicted RBP12.88□□□□□ -0.35
ECM1-201ENST00000346569 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
ECM1-201ENST00000346569 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
ECM1-201ENST00000346569 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 JAK2O60674 1132 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
ECM1-201ENST00000346569 RASA1P20936 1047 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 RCAN1P53805 252 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 RASSF7Q02833 373 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 TNIP1Q15025 636 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 GPR162Q16538 588 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 IQCA1Q86XH1 822 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
ECM1-201ENST00000346569 MKNK2Q9HBH9 465 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
ECM1-201ENST00000346569 TNKSO95271 1327 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 NID2Q14112 1375 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 ERICH2A1L162 156 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 ZBTB43O43298 467 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 STX6O43752 255 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 FDPSP14324 419 aaKnown RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 CDC27P30260 824 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 MCM4P33991 863 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 TFAP4Q01664 338 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 PICALMQ13492 652 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 NTRK3Q16288 839 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 TDRD3Q9H7E2 651 aaKnown RBP12.87□□□□□ -0.35
ECM1-201ENST00000346569 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
ECM1-201ENST00000346569 FOCADQ5VW36 1801 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 TSPY2A6NKD2 308 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 ENTPD3O75355 529 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 PDCP20941 246 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
ECM1-201ENST00000346569 NOVP48745 357 aa12.86□□□□□ -0.35
ECM1-201ENST00000346569 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.35
ECM1-201ENST00000346569 CCDC178Q5BJE1 867 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms