RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CALML3P27482 149 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 APBA1Q02410 837 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 SLC4A8Q2Y0W8 1093 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 MAP7D1Q3KQU3 841 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 OR8K1Q8NGG5 319 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 FERMT2Q96AC1 680 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 HYOU1Q9Y4L1 999 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 ZMYND10O75800 440 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 PDE4DQ08499 809 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 PHLDB3Q6NSJ2 640 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 SUDS3Q9H7L9 328 aaPredicted RBP13.48□□□□□ -0.25
COL12A1-202ENST00000345356 UAP1Q16222 522 aaPredicted RBP13.48□□□□□ -0.25
COL12A1-202ENST00000345356 VWA3BQ502W6 1294 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 TYW1BQ6NUM6 668 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 HAUS4Q9H6D7 363 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 TRMT112Q9UI30 125 aaKnown RBP13.48□□□□□ -0.25
COL12A1-202ENST00000345356 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 USP19O94966 1318 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 OPHN1O60890 802 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 STARD3NLO95772 234 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 ATP2A2P16615 1042 aaKnown RBP13.48□□□□□ -0.25
COL12A1-202ENST00000345356 TFCP2Q12800 502 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 HHATQ5VTY9 493 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 LMBR1LQ6UX01 489 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 TCHPQ9BT92 498 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
COL12A1-202ENST00000345356 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 CUL5Q93034 780 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 TRAF5O00463 557 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 STX2P32856 288 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 PPP1R2P41236 205 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 ASIC2Q16515 512 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 CFAP157Q5JU67 520 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 ABCB6Q9NP58 842 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 KIF1CO43896 1103 aaKnown RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 TPD52P55327 224 aaPredicted RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 GUCY2CP25092 1073 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 CCDC197Q8NCU1 140 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 TRIM6Q9C030 488 aaPredicted RBP13.47□□□□□ -0.25
COL12A1-202ENST00000345356 SERTAD1Q9UHV2 236 aa13.47□□□□□ -0.25
COL12A1-202ENST00000345356 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 CWF19L2Q2TBE0 894 aaKnown RBP13.46□□□□□ -0.25
COL12A1-202ENST00000345356 DCAF17Q5H9S7 520 aaPredicted RBP13.46□□□□□ -0.25
COL12A1-202ENST00000345356 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 MYSM1Q5VVJ2 828 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 CHUKO15111 745 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 COG7P83436 770 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 ZCCHC17Q9NP64 241 aaKnown RBP13.46□□□□□ -0.25
COL12A1-202ENST00000345356 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 NDUFA8P51970 172 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
COL12A1-202ENST00000345356 ENC1O14682 589 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 NAPAP54920 295 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 DBN1Q16643 649 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 BICD1Q96G01 975 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.26
COL12A1-202ENST00000345356 PCDHA7Q9UN72 937 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.26
COL12A1-202ENST00000345356 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.26
COL12A1-202ENST00000345356 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.26
COL12A1-202ENST00000345356 SPOPO43791 374 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 KRT40Q6A162 431 aa13.46□□□□□ -0.26
COL12A1-202ENST00000345356 ACTR5Q9H9F9 607 aaPredicted RBP13.46□□□□□ -0.26
COL12A1-202ENST00000345356 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 ANKRD20A3Q5VUR7 823 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
COL12A1-202ENST00000345356 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 A0A087WWV3 80 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 TCP1P17987 556 aaKnown RBP13.45□□□□□ -0.26
COL12A1-202ENST00000345356 BIRC2Q13490 618 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 CUL4AQ13619 759 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 LINS1Q8NG48 757 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 FAM169AQ9Y6X4 670 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 CALM1P0DP23 149 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 CALM2P0DP24 149 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 CALM3P0DP25 149 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 GPTP24298 496 aa13.45□□□□□ -0.26
COL12A1-202ENST00000345356 STAMQ92783 540 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms