RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TOP1P11387 765 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 CACNB3P54284 484 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 PPARAQ07869 468 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 GRIPAP1Q4V328 841 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 PODNQ7Z5L7 613 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 INTS4Q96HW7 963 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 DPEP1P16444 411 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 RRAGBQ5VZM2 374 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 HAUS7Q99871 368 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 PNMA2Q9UL42 364 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 DKC1O60832 514 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 ITPK1Q13572 414 aa18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 DHX37Q8IY37 1157 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-201ENST00000344626 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 APBB1IPQ7Z5R6 666 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 F13A1P00488 732 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 KRT13P13646 458 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 SFPQP23246 707 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 NCOA3Q9Y6Q9 1424 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 SPTLC2O15270 562 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 AKNAD1Q5T1N1 836 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 CCNA1P78396 465 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 ATL3Q6DD88 541 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 LRRC47Q8N1G4 583 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 GDPD2Q9HCC8 539 aa18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 V9GY48 417 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-201ENST00000344626 YEATS4O95619 227 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 PRR5LQ6MZQ0 368 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 CHMP2AO43633 222 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 FAM13AO94988 1023 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 GDF11O95390 407 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 MCM7P33993 719 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 FERMT2Q96AC1 680 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 TRIM47Q96LD4 638 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 ASIC1P78348 528 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
SMARCA4-201ENST00000344626 CCDC172P0C7W6 258 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 MYL10Q9BUA6 226 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 BIN1O00499 593 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 CPA1P15085 419 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 PI16Q6UXB8 463 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 NUP88Q99567 741 aaPredicted RBP18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 TDRD3Q9H7E2 651 aaKnown RBP18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 MINPP1Q9UNW1 487 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 KCTD2Q14681 263 aa18.59■□□□□ 0.57
SMARCA4-201ENST00000344626 AFMP43652 599 aa18.58■□□□□ 0.57
SMARCA4-201ENST00000344626 NBPF26B4DH59 902 aa18.58■□□□□ 0.57
SMARCA4-201ENST00000344626 UBE3CQ15386 1083 aa18.58■□□□□ 0.57
SMARCA4-201ENST00000344626 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.57
SMARCA4-201ENST00000344626 NBPF15Q8N660 670 aa18.58■□□□□ 0.57
SMARCA4-201ENST00000344626 MED14O60244 1454 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 FMNL1O95466 1100 aaPredicted RBP18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 PCP11498 1178 aaKnown RBP18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 C8orf34Q49A92 452 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 RILPL1Q5EBL4 403 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 FAM212AQ96EL1 285 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 MST1RQ04912 1400 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 FRMPD1Q5SYB0 1578 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 PSMA7O14818 248 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 MARCKSP29966 332 aaPredicted RBP18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 UIMC1Q96RL1 719 aa18.58■□□□□ 0.56
SMARCA4-201ENST00000344626 ADCY7P51828 1080 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 TEX35Q5T0J7 233 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 DDX39AO00148 427 aaKnown RBP18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 COL23A1Q86Y22 540 aaPredicted RBP18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 AZI2Q9H6S1 392 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 ENOX2Q16206 610 aaKnown RBP18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 ZSCAN12O43309 604 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 PHACTR2O75167 634 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 TDRD12Q587J7 1177 aaKnown RBP18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 CD209Q9NNX6 404 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 SNX14Q9Y5W7 946 aa18.57■□□□□ 0.56
SMARCA4-201ENST00000344626 H7C1W4 665 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 OSBPP22059 807 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 USP8P40818 1118 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 DYNLL1P63167 89 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 SPAG1Q07617 926 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 SEC62Q99442 399 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 ATP8A2Q9NTI2 1148 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 DBNLQ9UJU6 430 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 USO1O60763 962 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 KRT25Q7Z3Z0 450 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 DCCP43146 1447 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 TMEM232C9JQI7 657 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 TNNT3P45378 269 aaPredicted RBP18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 SLFN13Q68D06 897 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 MCTP2Q6DN12 878 aa18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 TRMT2AQ8IZ69 625 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-201ENST00000344626 hCG_1642624A0A1W2PR95 340 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 HS2ST1Q7LGA3 356 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 HAUS3Q68CZ6 603 aa18.55■□□□□ 0.56
SMARCA4-201ENST00000344626 GLG1Q92896 1179 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms