RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 MAGEB6Q8N7X4 407 aa24.35■■□□□ 1.49
CEACAM3-201ENST00000344550 PDHXO00330 501 aa24.34■■□□□ 1.49
CEACAM3-201ENST00000344550 CAP2P40123 477 aa24.34■■□□□ 1.49
CEACAM3-201ENST00000344550 ANTXR1Q9H6X2 564 aa24.34■■□□□ 1.49
CEACAM3-201ENST00000344550 APBB1O00213 710 aa24.33■■□□□ 1.49
CEACAM3-201ENST00000344550 KIF22Q14807 665 aa24.33■■□□□ 1.49
CEACAM3-201ENST00000344550 CD99L2Q8TCZ2 262 aa24.33■■□□□ 1.49
CEACAM3-201ENST00000344550 PARK7Q99497 189 aaKnown RBP24.33■■□□□ 1.49
CEACAM3-201ENST00000344550 TAOK2Q9UL54 1235 aa24.33■■□□□ 1.49
CEACAM3-201ENST00000344550 DOCK1Q14185 1865 aa24.32■■□□□ 1.48
CEACAM3-201ENST00000344550 HLA-DOAP06340 250 aa24.32■■□□□ 1.48
CEACAM3-201ENST00000344550 C17orf99Q6UX52 265 aa24.32■■□□□ 1.48
CEACAM3-201ENST00000344550 MAPKAPK5Q8IW41 473 aa24.32■■□□□ 1.48
CEACAM3-201ENST00000344550 DCTPP1Q9H773 170 aa24.32■■□□□ 1.48
CEACAM3-201ENST00000344550 PTPN22Q9Y2R2 807 aa24.32■■□□□ 1.48
CEACAM3-201ENST00000344550 FOCADQ5VW36 1801 aa24.31■■□□□ 1.48
CEACAM3-201ENST00000344550 ASNSP08243 561 aa24.31■■□□□ 1.48
CEACAM3-201ENST00000344550 PRMT2P55345 433 aa24.31■■□□□ 1.48
CEACAM3-201ENST00000344550 MLLT1Q03111 559 aaPredicted RBP24.31■■□□□ 1.48
CEACAM3-201ENST00000344550 SLC9C2Q5TAH2 1124 aa24.31■■□□□ 1.48
CEACAM3-201ENST00000344550 MYO5AQ9Y4I1 1855 aaKnown RBP24.31■■□□□ 1.48
CEACAM3-201ENST00000344550 LACTBP83111 547 aaPredicted RBP24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 GPAT2Q6NUI2 795 aa24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 PROCA1Q8NCQ7 364 aaPredicted RBP24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 HAUS7Q99871 368 aa24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 TRIM34Q9BYJ4 488 aa24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 EHD4Q9H223 541 aa24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 AS3MTQ9HBK9 375 aa24.3■■□□□ 1.48
CEACAM3-201ENST00000344550 USP17L5A8MUK1 530 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 PDE6AP16499 860 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 USP5P45974 858 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 DYNLL1P63167 89 aaKnown RBP24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 TTC6Q86TZ1 520 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 CRACR2BQ8N4Y2 399 aaPredicted RBP24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 ZNF280CQ8ND82 737 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 RIOK1Q9BRS2 568 aaKnown RBP24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 WDR18Q9BV38 432 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 PAG1Q9NWQ8 432 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 PALD1Q9ULE6 856 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 NDUFB9Q9Y6M9 179 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 ADGRA2Q96PE1 1338 aa24.29■■□□□ 1.48
CEACAM3-201ENST00000344550 GOLIM4O00461 696 aa24.28■■□□□ 1.48
CEACAM3-201ENST00000344550 RRP1P56182 461 aaKnown RBP24.28■■□□□ 1.48
CEACAM3-201ENST00000344550 MIGA1Q8NAN2 632 aa24.28■■□□□ 1.48
CEACAM3-201ENST00000344550 MAGEB6P1A0A0J9YX57 407 aa24.27■■□□□ 1.48
CEACAM3-201ENST00000344550 AAMPQ13685 434 aa24.27■■□□□ 1.48
CEACAM3-201ENST00000344550 DNAJC2Q99543 621 aaKnown RBP24.27■■□□□ 1.48
CEACAM3-201ENST00000344550 CRNKL1Q9BZJ0 848 aaKnown RBP24.27■■□□□ 1.48
CEACAM3-201ENST00000344550 AGTPBP1Q9UPW5 1226 aa24.27■■□□□ 1.48
CEACAM3-201ENST00000344550 CDK5RAP2Q96SN8 1893 aa24.27■■□□□ 1.48
CEACAM3-201ENST00000344550 TRIM75PA6NK02 468 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 FAM196BA6NMK8 535 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 SLURP2P0DP57 97 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 PABPC4Q13310 644 aaKnown RBP eCLIP24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 SH3D19Q5HYK7 790 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 ARMC5Q96C12 935 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 GPATCH3Q96I76 525 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 SERPINB13Q9UIV8 391 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 PNMA3Q9UL41 463 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 PHIPQ8WWQ0 1821 aa24.26■■□□□ 1.47
CEACAM3-201ENST00000344550 TCRBV5S4A2TA0A5A2 114 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 HOXD10P28358 340 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 SPP2Q13103 211 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 ZSCAN25Q6NSZ9 544 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 GADL1Q6ZQY3 521 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 BOLA2Q9H3K6 86 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 DNAJC18Q9H819 358 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 ECHDC1Q9NTX5 307 aa24.25■■□□□ 1.47
CEACAM3-201ENST00000344550 C19orf81C9J6K1 198 aa24.24■■□□□ 1.47
CEACAM3-201ENST00000344550 BCRP11274 1271 aa24.24■■□□□ 1.47
CEACAM3-201ENST00000344550 UBE3CQ15386 1083 aa24.24■■□□□ 1.47
CEACAM3-201ENST00000344550 TATDN1Q6P1N9 297 aa24.24■■□□□ 1.47
CEACAM3-201ENST00000344550 NBPF11Q86T75 865 aa24.24■■□□□ 1.47
CEACAM3-201ENST00000344550 ZNF532Q9HCE3 1301 aa24.24■■□□□ 1.47
CEACAM3-201ENST00000344550 PTPRFP10586 1907 aa24.23■■□□□ 1.47
CEACAM3-201ENST00000344550 ADD2P35612 726 aa24.23■■□□□ 1.47
CEACAM3-201ENST00000344550 RRP1BQ14684 758 aaKnown RBP24.23■■□□□ 1.47
CEACAM3-201ENST00000344550 SAP30BPQ9UHR5 308 aaKnown RBP24.23■■□□□ 1.47
CEACAM3-201ENST00000344550 CPA4Q9UI42 421 aa24.23■■□□□ 1.47
CEACAM3-201ENST00000344550 SIPA1L1O43166 1804 aa24.22■■□□□ 1.47
CEACAM3-201ENST00000344550 BACE1P56817 501 aa24.22■■□□□ 1.47
CEACAM3-201ENST00000344550 CAP1Q01518 475 aa24.21■■□□□ 1.47
CEACAM3-201ENST00000344550 ATP8A2Q9NTI2 1148 aa24.21■■□□□ 1.47
CEACAM3-201ENST00000344550 ZBTB21Q9ULJ3 1066 aa24.21■■□□□ 1.47
CEACAM3-201ENST00000344550 MYH1P12882 1939 aa24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 CYP2C8P10632 490 aa24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 PSMC4P43686 418 aa24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 GCLCP48506 637 aaPredicted RBP24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 SOX10P56693 466 aa24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 SMCR8Q8TEV9 937 aaPredicted RBP24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 PCDHB15Q9Y5E8 787 aa24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 HTTP42858 3142 aa24.2■■□□□ 1.46
CEACAM3-201ENST00000344550 ATAD5Q96QE3 1844 aa24.19■■□□□ 1.46
CEACAM3-201ENST00000344550 USP17L10C9JJH3 530 aa24.19■■□□□ 1.46
CEACAM3-201ENST00000344550 TMOD4Q9NZQ9 345 aa24.19■■□□□ 1.46
CEACAM3-201ENST00000344550 SRRDQ9UH36 339 aa24.19■■□□□ 1.46
CEACAM3-201ENST00000344550 SMARCA5O60264 1052 aaPredicted RBP24.18■■□□□ 1.46
CEACAM3-201ENST00000344550 POLR3DP05423 398 aaPredicted RBP24.18■■□□□ 1.46
CEACAM3-201ENST00000344550 OSBPP22059 807 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms