RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 KLC4Q9NSK0 619 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 RHPN1Q8TCX5 695 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 EPHB4P54760 987 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 MYO1EQ12965 1108 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 STX2P32856 288 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 HAND2P61296 217 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 PPP1R21Q6ZMI0 780 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 ST13P4Q8IZP2 240 aaPredicted RBP15.14■□□□□ 0.01
TRIO-202ENST00000344204 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
TRIO-202ENST00000344204 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
TRIO-202ENST00000344204 CUTAO60888 179 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 AMOTQ4VCS5 1084 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
TRIO-202ENST00000344204 RTN1Q16799 776 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 KLHL7Q8IXQ5 586 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 SOS1Q07889 1333 aaPredicted RBP15.13■□□□□ 0.01
TRIO-202ENST00000344204 RPS6KB1P23443 525 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 UGGT2Q9NYU1 1516 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 NBPF10Q6P3W6 841 aaKnown RBP15.13■□□□□ 0.01
TRIO-202ENST00000344204 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
TRIO-202ENST00000344204 TNNQ9UQP3 1299 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 BAG2O95816 211 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 CDK19Q9BWU1 502 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 KRT9P35527 623 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
TRIO-202ENST00000344204 PRR16Q569H4 304 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 ACTN3Q08043 901 aaPredicted RBP15.13■□□□□ 0.01
TRIO-202ENST00000344204 ST7Q9NRC1 585 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRIO-202ENST00000344204 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 KIAA1468Q9P260 1216 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 STX10O60499 249 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 MEIS3Q99687 375 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 NUP160Q12769 1436 aa15.13■□□□□ 0.01
TRIO-202ENST00000344204 NR1D1P20393 614 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 NAA16Q6N069 864 aaPredicted RBP15.12■□□□□ 0.01
TRIO-202ENST00000344204 BCAP29Q9UHQ4 241 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 SATB2Q9UPW6 733 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 CUL3Q13618 768 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 PPP2R5EQ16537 467 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 IQUBQ8NA54 791 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 PSMB7Q99436 277 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 CTIFO43310 598 aaKnown RBP15.12■□□□□ 0.01
TRIO-202ENST00000344204 SLFN14P0C7P3 912 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 DRP2Q13474 957 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 FAM133BQ5BKY9 247 aaKnown RBP15.12■□□□□ 0.01
TRIO-202ENST00000344204 CPA1P15085 419 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 POSTNQ15063 836 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 JARID2Q92833 1246 aaPredicted RBP15.12■□□□□ 0.01
TRIO-202ENST00000344204 OSBPL1AQ9BXW6 950 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 TRIM31Q9BZY9 425 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 RWDD2BP57060 319 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
TRIO-202ENST00000344204 HSPA1LP34931 641 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 CORO7P57737 925 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 IQCDQ96DY2 449 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 ENO4A6NNW6 628 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 ABCC5O15440 1437 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 ZNF513Q8N8E2 541 aaPredicted RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 MCMDC2Q4G0Z9 681 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 SDCCAG8Q86SQ7 713 aaPredicted RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 NNTQ13423 1086 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 ZWINTO95229 277 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 IFIT1P09914 478 aaKnown RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 HMGB1P1B2RPK0 211 aaPredicted RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
TRIO-202ENST00000344204 PCYT1AP49585 367 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 BATF3Q9NR55 127 aa15.11■□□□□ 0.01
TRIO-202ENST00000344204 PDHA1P08559 390 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 VPS41P49754 854 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 HYOU1Q9Y4L1 999 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 MYO5CQ9NQX4 1742 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 HIBCHQ6NVY1 386 aaPredicted RBP15.1■□□□□ 0.01
TRIO-202ENST00000344204 ANGPTL2Q9UKU9 493 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 SYCE1Q8N0S2 351 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 MYL6BP14649 208 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 POLR2DO15514 142 aaKnown RBP15.1■□□□□ 0.01
TRIO-202ENST00000344204 TROVE2P10155 538 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIO-202ENST00000344204 RPS6KA1Q15418 735 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 ANKRD20A3Q5VUR7 823 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 RRS1Q15050 365 aaKnown RBP15.1■□□□□ 0.01
TRIO-202ENST00000344204 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
TRIO-202ENST00000344204 TEX14Q8IWB6 1497 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 ZNF76P36508 570 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 MFSD6Q6ZSS7 791 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 TTC21AQ8NDW8 1320 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 STXBP4Q6ZWJ1 553 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 NME8Q8N427 588 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 VPS16Q9H269 839 aa15.09■□□□□ 0.01
TRIO-202ENST00000344204 LRP2BPQ9P2M1 347 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms