RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 RANBP6O60518 1105 aaKnown RBP25.84■■□□□ 1.73
CACNB1-201ENST00000344140 CCT2P78371 535 aaKnown RBP25.84■■□□□ 1.73
CACNB1-201ENST00000344140 HMGN5P82970 282 aaKnown RBP25.84■■□□□ 1.73
CACNB1-201ENST00000344140 WTAPQ15007 396 aa25.84■■□□□ 1.73
CACNB1-201ENST00000344140 IQCA1Q86XH1 822 aa25.84■■□□□ 1.73
CACNB1-201ENST00000344140 ZNF287Q9HBT7 754 aa25.84■■□□□ 1.73
CACNB1-201ENST00000344140 USP40Q9NVE5 1235 aa25.84■■□□□ 1.73
CACNB1-201ENST00000344140 ZNRF3Q9ULT6 936 aa25.84■■□□□ 1.73
CACNB1-201ENST00000344140 MCM4P33991 863 aa25.83■■□□□ 1.73
CACNB1-201ENST00000344140 SMARCC2Q8TAQ2 1214 aa25.83■■□□□ 1.73
CACNB1-201ENST00000344140 HPS5Q9UPZ3 1129 aa25.83■■□□□ 1.73
CACNB1-201ENST00000344140 CCDC69A6NI79 296 aa25.83■■□□□ 1.72
CACNB1-201ENST00000344140 PRDM1O75626 825 aa25.83■■□□□ 1.72
CACNB1-201ENST00000344140 APOA5Q6Q788 366 aa25.83■■□□□ 1.72
CACNB1-201ENST00000344140 SAP30BPQ9UHR5 308 aaKnown RBP25.83■■□□□ 1.72
CACNB1-201ENST00000344140 KIF3AQ9Y496 699 aa25.83■■□□□ 1.72
CACNB1-201ENST00000344140 CDK5RAP2Q96SN8 1893 aa25.82■■□□□ 1.72
CACNB1-201ENST00000344140 VIL1P09327 827 aaKnown RBP25.82■■□□□ 1.72
CACNB1-201ENST00000344140 CDC42EP5Q6NZY7 148 aa25.82■■□□□ 1.72
CACNB1-201ENST00000344140 RSBN1LQ6PCB5 846 aaPredicted RBP25.82■■□□□ 1.72
CACNB1-201ENST00000344140 SYNE3Q6ZMZ3 975 aa25.82■■□□□ 1.72
CACNB1-201ENST00000344140 NSUN7Q8NE18 718 aaKnown RBP25.82■■□□□ 1.72
CACNB1-201ENST00000344140 NCOA5Q9HCD5 579 aaKnown RBP25.82■■□□□ 1.72
CACNB1-201ENST00000344140 SLC12A7Q9Y666 1083 aa25.82■■□□□ 1.72
CACNB1-201ENST00000344140 EVX2Q03828 476 aa25.81■■□□□ 1.72
CACNB1-201ENST00000344140 LARP1BQ659C4 914 aaKnown RBP25.81■■□□□ 1.72
CACNB1-201ENST00000344140 ZSCAN10Q96SZ4 725 aaPredicted RBP25.81■■□□□ 1.72
CACNB1-201ENST00000344140 PSME4Q14997 1843 aa25.81■■□□□ 1.72
CACNB1-201ENST00000344140 ZBTB43O43298 467 aa25.81■■□□□ 1.72
CACNB1-201ENST00000344140 JAK2O60674 1132 aa25.81■■□□□ 1.72
CACNB1-201ENST00000344140 WDHD1O75717 1129 aaPredicted RBP25.81■■□□□ 1.72
CACNB1-201ENST00000344140 RCAN1P53805 252 aa25.81■■□□□ 1.72
CACNB1-201ENST00000344140 ZKSCAN3Q9BRR0 538 aa25.81■■□□□ 1.72
CACNB1-201ENST00000344140 TNKSO95271 1327 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 LTBP3Q9NS15 1303 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 DDX11L8A8MPP1 907 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 CTDNEP1O95476 244 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 METAP2P50579 478 aaKnown RBP eCLIP25.8■■□□□ 1.72
CACNB1-201ENST00000344140 PLCD1P51178 756 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 RBM5P52756 815 aaKnown RBP eCLIP25.8■■□□□ 1.72
CACNB1-201ENST00000344140 MKNK2Q9HBH9 465 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 SENP2Q9HC62 589 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 DDX60LQ5H9U9 1706 aaKnown RBP25.8■■□□□ 1.72
CACNB1-201ENST00000344140 FER1L6Q2WGJ9 1857 aa25.8■■□□□ 1.72
CACNB1-201ENST00000344140 SRCAPQ6ZRS2 3230 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 PTPDC1A2A3K4 754 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 PSMD14O00487 310 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 CPLX1O14810 134 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 RAD17O75943 681 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 ZSCAN22P10073 491 aaPredicted RBP25.79■■□□□ 1.72
CACNB1-201ENST00000344140 SEC23AQ15436 765 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 JDP2Q8WYK2 163 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 FOCADQ5VW36 1801 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 COL4A5P29400 1685 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 NFKBIEO00221 500 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 BAG4O95429 457 aaKnown RBP25.79■■□□□ 1.72
CACNB1-201ENST00000344140 SLC4A8Q2Y0W8 1093 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 TTC6Q86TZ1 520 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 FAM184AQ8NB25 1140 aa25.79■■□□□ 1.72
CACNB1-201ENST00000344140 PICALMQ13492 652 aa25.78■■□□□ 1.72
CACNB1-201ENST00000344140 C16orf86Q6ZW13 317 aa25.78■■□□□ 1.72
CACNB1-201ENST00000344140 DYNLL2Q96FJ2 89 aa25.78■■□□□ 1.72
CACNB1-201ENST00000344140 TSPY2A6NKD2 308 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 GOLGA6L22H0YM25 854 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 GPR162Q16538 588 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 CPLX2Q6PUV4 134 aaKnown RBP25.77■■□□□ 1.72
CACNB1-201ENST00000344140 MICU3Q86XE3 530 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 ENAHQ8N8S7 591 aaPredicted RBP25.77■■□□□ 1.72
CACNB1-201ENST00000344140 GMLQ99445 158 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 NID2Q14112 1375 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 CDKL5O76039 1030 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 PTMSP20962 102 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 CCDC178Q5BJE1 867 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 FOXD4L5Q5VV16 416 aaPredicted RBP25.77■■□□□ 1.72
CACNB1-201ENST00000344140 FOXD4L4Q8WXT5 416 aaPredicted RBP25.77■■□□□ 1.72
CACNB1-201ENST00000344140 DDX11Q96FC9 970 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 HDAC9Q9UKV0 1011 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 MTMR6Q9Y217 621 aa25.77■■□□□ 1.72
CACNB1-201ENST00000344140 GOLGA8AA7E2F4 631 aa25.76■■□□□ 1.71
CACNB1-201ENST00000344140 DTNBO60941 627 aa25.76■■□□□ 1.71
CACNB1-201ENST00000344140 NPM3O75607 178 aaKnown RBP25.76■■□□□ 1.71
CACNB1-201ENST00000344140 YBX3P16989 372 aaKnown RBP eCLIP25.76■■□□□ 1.71
CACNB1-201ENST00000344140 IFIT1BQ5T764 474 aaKnown RBP25.76■■□□□ 1.71
CACNB1-201ENST00000344140 ARHGAP27Q6ZUM4 889 aa25.76■■□□□ 1.71
CACNB1-201ENST00000344140 ZNF444Q8N0Y2 327 aaPredicted RBP25.76■■□□□ 1.71
CACNB1-201ENST00000344140 AGBL3Q8NEM8 1001 aa25.76■■□□□ 1.71
CACNB1-201ENST00000344140 OSBPL5Q9H0X9 879 aaPredicted RBP25.76■■□□□ 1.71
CACNB1-201ENST00000344140 DDX4Q9NQI0 724 aaKnown RBP25.76■■□□□ 1.71
CACNB1-201ENST00000344140 ATP6V1DQ9Y5K8 247 aa25.76■■□□□ 1.71
CACNB1-201ENST00000344140 CFAP100Q494V2 611 aa25.75■■□□□ 1.71
CACNB1-201ENST00000344140 FAM47AQ5JRC9 791 aa25.75■■□□□ 1.71
CACNB1-201ENST00000344140 OGFOD1Q8N543 542 aa25.75■■□□□ 1.71
CACNB1-201ENST00000344140 IDI2Q9BXS1 227 aa25.75■■□□□ 1.71
CACNB1-201ENST00000344140 MYH1P12882 1939 aa25.75■■□□□ 1.71
CACNB1-201ENST00000344140 ADAMTSL1Q8N6G6 1762 aa25.75■■□□□ 1.71
CACNB1-201ENST00000344140 CDK8P49336 464 aa25.74■■□□□ 1.71
CACNB1-201ENST00000344140 TFAP4Q01664 338 aa25.74■■□□□ 1.71
CACNB1-201ENST00000344140 PPP2R5BQ15173 497 aa25.74■■□□□ 1.71
CACNB1-201ENST00000344140 RAB11FIP4Q86YS3 637 aa25.74■■□□□ 1.71
CACNB1-201ENST00000344140 ZNF654Q8IZM8 581 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms