RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 SLC4A4Q9Y6R1 1079 aa27.6■■■□□ 2.01
NELFB-201ENST00000343053 KIF2AO00139 706 aaPredicted RBP27.6■■■□□ 2.01
NELFB-201ENST00000343053 TEX13AQ9BXU3 409 aaPredicted RBP27.6■■■□□ 2.01
NELFB-201ENST00000343053 FAM205CA6NFA0 338 aa27.59■■■□□ 2.01
NELFB-201ENST00000343053 FMNL1O95466 1100 aaPredicted RBP27.59■■■□□ 2.01
NELFB-201ENST00000343053 MAP3K12Q12852 859 aa27.59■■■□□ 2.01
NELFB-201ENST00000343053 AKNAD1Q5T1N1 836 aa27.59■■■□□ 2.01
NELFB-201ENST00000343053 VSTM4Q8IW00 320 aa27.59■■■□□ 2.01
NELFB-201ENST00000343053 UQCRFS1P1P0C7P4 283 aa27.59■■■□□ 2.01
NELFB-201ENST00000343053 RTN1Q16799 776 aa27.59■■■□□ 2.01
NELFB-201ENST00000343053 MMP1P03956 469 aa27.58■■■□□ 2.01
NELFB-201ENST00000343053 ADKP55263 362 aaKnown RBP27.58■■■□□ 2.01
NELFB-201ENST00000343053 BTG4Q9NY30 223 aa27.58■■■□□ 2.01
NELFB-201ENST00000343053 MAN1B1Q9UKM7 699 aa27.58■■■□□ 2.01
NELFB-201ENST00000343053 URI1O94763 535 aaPredicted RBP27.58■■■□□ 2.01
NELFB-201ENST00000343053 SDR42E1Q8WUS8 393 aa27.58■■■□□ 2.01
NELFB-201ENST00000343053 ZNF512BQ96KM6 892 aaPredicted RBP27.58■■■□□ 2.01
NELFB-201ENST00000343053 L2HGDHQ9H9P8 463 aa27.58■■■□□ 2.01
NELFB-201ENST00000343053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.58■■■□□ 2.014e-6■■□□□ 12.6
NELFB-201ENST00000343053 MORC2Q9Y6X9 1032 aaPredicted RBP27.58■■■□□ 2.01
NELFB-201ENST00000343053 WTAPQ15007 396 aa27.57■■■□□ 2
NELFB-201ENST00000343053 MPHOSPH8Q99549 860 aa27.57■■■□□ 2
NELFB-201ENST00000343053 MINDY4BA8MYZ0 360 aa27.57■■■□□ 2
NELFB-201ENST00000343053 CDK11BP21127 795 aaKnown RBP27.57■■■□□ 2
NELFB-201ENST00000343053 CASP1P29466 404 aa27.57■■■□□ 2
NELFB-201ENST00000343053 ETF1P62495 437 aaKnown RBP27.57■■■□□ 2
NELFB-201ENST00000343053 POSTNQ15063 836 aa27.57■■■□□ 2
NELFB-201ENST00000343053 SAFBQ15424 915 aaKnown RBP eCLIP27.57■■■□□ 2
NELFB-201ENST00000343053 ARHGAP29Q52LW3 1261 aa27.57■■■□□ 2
NELFB-201ENST00000343053 EPC1Q9H2F5 836 aa27.57■■■□□ 2
NELFB-201ENST00000343053 SLAIN2Q9P270 581 aa27.57■■■□□ 2
NELFB-201ENST00000343053 NFE2L3Q9Y4A8 694 aa27.57■■■□□ 2
NELFB-201ENST00000343053 NUP98P52948 1817 aa27.57■■■□□ 2
NELFB-201ENST00000343053 CBFA2T2O43439 604 aa27.56■■■□□ 2
NELFB-201ENST00000343053 SLC5A1P13866 664 aa27.56■■■□□ 2
NELFB-201ENST00000343053 FGFR2P21802 821 aa27.56■■■□□ 2
NELFB-201ENST00000343053 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.56■■■□□ 2
NELFB-201ENST00000343053 ITGB4P16144 1822 aa27.56■■■□□ 2
NELFB-201ENST00000343053 LIFRP42702 1097 aa27.55■■■□□ 2
NELFB-201ENST00000343053 TRIM22Q8IYM9 498 aa27.55■■■□□ 2
NELFB-201ENST00000343053 CABP5Q9NP86 173 aa27.55■■■□□ 2
NELFB-201ENST00000343053 FBXO2Q9UK22 296 aaPredicted RBP27.55■■■□□ 2
NELFB-201ENST00000343053 IFNAR1P17181 557 aa27.55■■■□□ 2
NELFB-201ENST00000343053 KRT222Q8N1A0 295 aa27.55■■■□□ 2
NELFB-201ENST00000343053 SOS2Q07890 1332 aaPredicted RBP27.55■■■□□ 2
NELFB-201ENST00000343053 XIRP1Q702N8 1843 aaKnown RBP27.55■■■□□ 2
NELFB-201ENST00000343053 WTIPA6NIX2 430 aaPredicted RBP27.54■■■□□ 2
NELFB-201ENST00000343053 CCDC93Q567U6 631 aa27.54■■■□□ 2
NELFB-201ENST00000343053 SUSD4Q5VX71 490 aa27.54■■■□□ 2
NELFB-201ENST00000343053 TRIM65Q6PJ69 517 aa27.54■■■□□ 2
NELFB-201ENST00000343053 DESI2Q9BSY9 194 aa27.54■■■□□ 2
NELFB-201ENST00000343053 SAMSN1Q9NSI8 373 aaKnown RBP27.54■■■□□ 2
NELFB-201ENST00000343053 SLIT2O94813 1529 aa27.54■■■□□ 2
NELFB-201ENST00000343053 BAZ2BQ9UIF8 2168 aaKnown RBP27.54■■■□□ 2
NELFB-201ENST00000343053 PRDM1O75626 825 aa27.54■■■□□ 2
NELFB-201ENST00000343053 MDM2Q00987 491 aaPredicted RBP27.54■■■□□ 2
NELFB-201ENST00000343053 REXO1L1PQ8IX06 675 aa27.54■■■□□ 2
NELFB-201ENST00000343053 LRP2BPQ9P2M1 347 aa27.54■■■□□ 2
NELFB-201ENST00000343053 KLHL10Q6JEL2 608 aa27.54■■■□□ 2
NELFB-201ENST00000343053 ABCF2Q9UG63 623 aa27.54■■■□□ 2
NELFB-201ENST00000343053 FAM237AA0A1B0GTK4 181 aa27.53■■■□□ 2
NELFB-201ENST00000343053 ADGRA1Q86SQ6 560 aa27.53■■■□□ 2
NELFB-201ENST00000343053 CLCN6P51797 869 aa27.53■■■□□ 2
NELFB-201ENST00000343053 TOGARAM2Q6ZUX3 1019 aa27.53■■■□□ 2
NELFB-201ENST00000343053 CARD6Q9BX69 1037 aa27.53■■■□□ 2
NELFB-201ENST00000343053 VPS54Q9P1Q0 977 aa27.53■■■□□ 2
NELFB-201ENST00000343053 CYP2D7A0A087X1C5 515 aa27.52■■■□□ 2
NELFB-201ENST00000343053 COBLO75128 1261 aa27.52■■■□□ 2
NELFB-201ENST00000343053 TMEM139Q8IV31 216 aa27.52■■■□□ 2
NELFB-201ENST00000343053 KRT23Q9C075 422 aa27.52■■■□□ 2
NELFB-201ENST00000343053 CSRNP2Q9H175 543 aa27.52■■■□□ 2
NELFB-201ENST00000343053 MROH5Q6ZUA9 1318 aa27.52■■■□□ 2
NELFB-201ENST00000343053 ERICH2A1L162 156 aa27.52■■■□□ 2
NELFB-201ENST00000343053 AFMP43652 599 aa27.52■■■□□ 2
NELFB-201ENST00000343053 STX17P56962 302 aa27.52■■■□□ 2
NELFB-201ENST00000343053 SMARCE1Q969G3 411 aa27.52■■■□□ 2
NELFB-201ENST00000343053 SHISA4Q96DD7 197 aa27.52■■■□□ 2
NELFB-201ENST00000343053 MED15Q96RN5 788 aa27.52■■■□□ 2
NELFB-201ENST00000343053 PPP2R2CQ9Y2T4 447 aa27.52■■■□□ 2
NELFB-201ENST00000343053 LRP6O75581 1613 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 ZNF654Q8IZM8 581 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 DHX58Q96C10 678 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 STK36Q9NRP7 1315 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 ANKRD36CQ5JPF3 1778 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 ALX1Q15699 326 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 EARS2Q5JPH6 523 aaKnown RBP27.51■■□□□ 1.99
NELFB-201ENST00000343053 MNS1Q8NEH6 495 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 CNNM2Q9H8M5 875 aa27.51■■□□□ 1.99
NELFB-201ENST00000343053 VWA3AA6NCI4 1184 aa27.5■■□□□ 1.99
NELFB-201ENST00000343053 PTPREP23469 700 aa27.5■■□□□ 1.99
NELFB-201ENST00000343053 SART3Q15020 963 aaKnown RBP27.5■■□□□ 1.99
NELFB-201ENST00000343053 CRACR2BQ8N4Y2 399 aaPredicted RBP27.5■■□□□ 1.99
NELFB-201ENST00000343053 WDR24Q96S15 920 aa27.5■■□□□ 1.99
NELFB-201ENST00000343053 KCNJ6P48051 423 aa27.5■■□□□ 1.99
NELFB-201ENST00000343053 NOM1Q5C9Z4 860 aaKnown RBP27.5■■□□□ 1.99
NELFB-201ENST00000343053 SMYD4Q8IYR2 804 aaPredicted RBP27.5■■□□□ 1.99
NELFB-201ENST00000343053 BAG1Q99933 345 aaPredicted RBP27.5■■□□□ 1.99
NELFB-201ENST00000343053 MTF1Q14872 753 aa27.49■■□□□ 1.99
NELFB-201ENST00000343053 KARSQ15046 597 aaKnown RBP27.49■■□□□ 1.99
NELFB-201ENST00000343053 WASF1Q92558 559 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms