RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 A0A0G2JLL6 359 aaPredicted RBP24.52■■□□□ 1.52
SYNE2-201ENST00000341472 CAP1Q01518 475 aa24.52■■□□□ 1.52
SYNE2-201ENST00000341472 C17orf99Q6UX52 265 aa24.52■■□□□ 1.52
SYNE2-201ENST00000341472 PRRT2Q7Z6L0 340 aaPredicted RBP24.52■■□□□ 1.52
SYNE2-201ENST00000341472 MIGA1Q8NAN2 632 aa24.52■■□□□ 1.52
SYNE2-201ENST00000341472 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.52■■□□□ 1.52
SYNE2-201ENST00000341472 TRIM75PA6NK02 468 aa24.51■■□□□ 1.51
SYNE2-201ENST00000341472 CAP2P40123 477 aa24.51■■□□□ 1.51
SYNE2-201ENST00000341472 CPA4Q9UI42 421 aa24.51■■□□□ 1.51
SYNE2-201ENST00000341472 PALD1Q9ULE6 856 aa24.51■■□□□ 1.51
SYNE2-201ENST00000341472 FLT1P17948 1338 aa24.51■■□□□ 1.51
SYNE2-201ENST00000341472 COL2A1P02458 1487 aaPredicted RBP24.51■■□□□ 1.51
SYNE2-201ENST00000341472 GADL1Q6ZQY3 521 aa24.5■■□□□ 1.51
SYNE2-201ENST00000341472 CCDC84Q86UT8 332 aaPredicted RBP24.5■■□□□ 1.51
SYNE2-201ENST00000341472 PARK7Q99497 189 aaKnown RBP24.5■■□□□ 1.51
SYNE2-201ENST00000341472 TRIM34Q9BYJ4 488 aa24.5■■□□□ 1.51
SYNE2-201ENST00000341472 SAP30BPQ9UHR5 308 aaKnown RBP24.5■■□□□ 1.51
SYNE2-201ENST00000341472 USP5P45974 858 aa24.49■■□□□ 1.51
SYNE2-201ENST00000341472 LACTBP83111 547 aaPredicted RBP24.49■■□□□ 1.51
SYNE2-201ENST00000341472 RRP1BQ14684 758 aaKnown RBP24.49■■□□□ 1.51
SYNE2-201ENST00000341472 CRACR2BQ8N4Y2 399 aaPredicted RBP24.49■■□□□ 1.51
SYNE2-201ENST00000341472 DNAJC2Q99543 621 aaKnown RBP24.49■■□□□ 1.51
SYNE2-201ENST00000341472 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.49■■□□□ 1.51
SYNE2-201ENST00000341472 AK9Q5TCS8 1911 aa24.49■■□□□ 1.51
SYNE2-201ENST00000341472 GOLIM4O00461 696 aa24.48■■□□□ 1.51
SYNE2-201ENST00000341472 HLA-DOAP06340 250 aa24.48■■□□□ 1.51
SYNE2-201ENST00000341472 SPP2Q13103 211 aa24.48■■□□□ 1.51
SYNE2-201ENST00000341472 SLC9C2Q5TAH2 1124 aa24.48■■□□□ 1.51
SYNE2-201ENST00000341472 METTL16Q86W50 562 aaKnown RBP24.48■■□□□ 1.51
SYNE2-201ENST00000341472 TBC1D2Q9BYX2 928 aa24.48■■□□□ 1.51
SYNE2-201ENST00000341472 LRRCC1Q9C099 1032 aa24.48■■□□□ 1.51
SYNE2-201ENST00000341472 USP17L5A8MUK1 530 aa24.47■■□□□ 1.51
SYNE2-201ENST00000341472 CYP2C8P10632 490 aa24.47■■□□□ 1.51
SYNE2-201ENST00000341472 ZNF280CQ8ND82 737 aa24.47■■□□□ 1.51
SYNE2-201ENST00000341472 BOLA2Q9H3K6 86 aa24.47■■□□□ 1.51
SYNE2-201ENST00000341472 SLC45A1Q9Y2W3 748 aa24.47■■□□□ 1.51
SYNE2-201ENST00000341472 GNRH1P01148 92 aa24.46■■□□□ 1.51
SYNE2-201ENST00000341472 ATP5JP18859 108 aa24.46■■□□□ 1.51
SYNE2-201ENST00000341472 ARHGAP39Q9C0H5 1083 aa24.46■■□□□ 1.51
SYNE2-201ENST00000341472 MAGEB6P1A0A0J9YX57 407 aa24.45■■□□□ 1.5
SYNE2-201ENST00000341472 PDE6AP16499 860 aa24.45■■□□□ 1.5
SYNE2-201ENST00000341472 AS3MTQ9HBK9 375 aa24.45■■□□□ 1.5
SYNE2-201ENST00000341472 ADGRA2Q96PE1 1338 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 SMARCA5O60264 1052 aaPredicted RBP24.44■■□□□ 1.5
SYNE2-201ENST00000341472 ECM2O94769 699 aaPredicted RBP24.44■■□□□ 1.5
SYNE2-201ENST00000341472 ASNSP08243 561 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 HOXD10P28358 340 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 PSMC4P43686 418 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 ARMC5Q96C12 935 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 RIOK1Q9BRS2 568 aaKnown RBP24.44■■□□□ 1.5
SYNE2-201ENST00000341472 DCTPP1Q9H773 170 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 GINM1Q9NU53 330 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 AGTPBP1Q9UPW5 1226 aa24.44■■□□□ 1.5
SYNE2-201ENST00000341472 ZNF532Q9HCE3 1301 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 FMNL1O95466 1100 aaPredicted RBP24.43■■□□□ 1.5
SYNE2-201ENST00000341472 PRMT2P55345 433 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 SLC4A8Q2Y0W8 1093 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 NBPF11Q86T75 865 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 TTC6Q86TZ1 520 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 EDC3Q96F86 508 aaKnown RBP24.43■■□□□ 1.5
SYNE2-201ENST00000341472 HAUS7Q99871 368 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 WDR18Q9BV38 432 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 DNAJC18Q9H819 358 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 PAG1Q9NWQ8 432 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 PTCH2Q9Y6C5 1203 aa24.43■■□□□ 1.5
SYNE2-201ENST00000341472 BCRP11274 1271 aa24.42■■□□□ 1.5
SYNE2-201ENST00000341472 PROCA1Q8NCQ7 364 aaPredicted RBP24.42■■□□□ 1.5
SYNE2-201ENST00000341472 LAMB1P07942 1786 aa24.42■■□□□ 1.5
SYNE2-201ENST00000341472 JAG1P78504 1218 aa24.41■■□□□ 1.5
SYNE2-201ENST00000341472 SMCR8Q8TEV9 937 aaPredicted RBP24.41■■□□□ 1.5
SYNE2-201ENST00000341472 TRIM47Q96LD4 638 aa24.41■■□□□ 1.5
SYNE2-201ENST00000341472 CRNKL1Q9BZJ0 848 aaKnown RBP24.41■■□□□ 1.5
SYNE2-201ENST00000341472 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
SYNE2-201ENST00000341472 HMGCS2P54868 508 aa24.4■■□□□ 1.5
SYNE2-201ENST00000341472 PABPC4Q13310 644 aaKnown RBP eCLIP24.4■■□□□ 1.5
SYNE2-201ENST00000341472 SLC9C1Q4G0N8 1177 aa24.4■■□□□ 1.5
SYNE2-201ENST00000341472 TREML2Q5T2D2 321 aa24.4■■□□□ 1.5
SYNE2-201ENST00000341472 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.4■■□□□ 1.5
SYNE2-201ENST00000341472 SERPINB13Q9UIV8 391 aa24.4■■□□□ 1.5
SYNE2-201ENST00000341472 PNMA3Q9UL41 463 aa24.4■■□□□ 1.5
SYNE2-201ENST00000341472 GDF11O95390 407 aa24.39■■□□□ 1.49
SYNE2-201ENST00000341472 POLR3DP05423 398 aaPredicted RBP24.39■■□□□ 1.49
SYNE2-201ENST00000341472 CTGFP29279 349 aa24.39■■□□□ 1.49
SYNE2-201ENST00000341472 SH3D19Q5HYK7 790 aa24.39■■□□□ 1.49
SYNE2-201ENST00000341472 EHD4Q9H223 541 aa24.39■■□□□ 1.49
SYNE2-201ENST00000341472 SRRDQ9UH36 339 aa24.39■■□□□ 1.49
SYNE2-201ENST00000341472 OSBPP22059 807 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 FCGRTP55899 365 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 RRP1P56182 461 aaKnown RBP24.38■■□□□ 1.49
SYNE2-201ENST00000341472 BACE1P56817 501 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 TATDN1Q6P1N9 297 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 YTHDC1Q96MU7 727 aaKnown RBP24.38■■□□□ 1.49
SYNE2-201ENST00000341472 TMEM106CQ9BVX2 250 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 ECHDC1Q9NTX5 307 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 TMOD4Q9NZQ9 345 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 ZBTB21Q9ULJ3 1066 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 PCDHB15Q9Y5E8 787 aa24.38■■□□□ 1.49
SYNE2-201ENST00000341472 C19orf81C9J6K1 198 aa24.37■■□□□ 1.49
SYNE2-201ENST00000341472 ADD2P35612 726 aa24.37■■□□□ 1.49
SYNE2-201ENST00000341472 ZNF333Q96JL9 665 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms