RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 IL1R1P14778 569 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 EIF6P56537 245 aaKnown RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 COPS2P61201 443 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 PTPN12Q05209 780 aaKnown RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 TNIP1Q15025 636 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 EPHA10Q5JZY3 1008 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 ERO1AQ96HE7 468 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 NLRP3Q96P20 1036 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 MRIQ9BWK5 157 aa4.35□□□□□ -1.71
CCDC66-202ENST00000341455 FAM217BQ9NTX9 383 aaPredicted RBP4.35□□□□□ -1.71
CCDC66-202ENST00000341455 AK9Q5TCS8 1911 aa4.34□□□□□ -1.71
CCDC66-202ENST00000341455 PPEF1O14829 653 aaPredicted RBP4.34□□□□□ -1.71
CCDC66-202ENST00000341455 FKTNO75072 461 aa4.34□□□□□ -1.71
CCDC66-202ENST00000341455 RAB11FIP3O75154 756 aa4.34□□□□□ -1.71
CCDC66-202ENST00000341455 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.71
CCDC66-202ENST00000341455 ZBTB48P10074 688 aaPredicted RBP4.34□□□□□ -1.71
CCDC66-202ENST00000341455 CHRNA5P30532 468 aa4.34□□□□□ -1.71
CCDC66-202ENST00000341455 CWF19L2Q2TBE0 894 aaKnown RBP4.34□□□□□ -1.71
CCDC66-202ENST00000341455 SIRT2Q8IXJ6 389 aa4.34□□□□□ -1.71
CCDC66-202ENST00000341455 GMPR2Q9P2T1 348 aaKnown RBP4.34□□□□□ -1.71
CCDC66-202ENST00000341455 TRMT112Q9UI30 125 aaKnown RBP4.34□□□□□ -1.71
CCDC66-202ENST00000341455 XDHP47989 1333 aa4.34□□□□□ -1.71
CCDC66-202ENST00000341455 MAP4K4O95819 1239 aaPredicted RBP4.34□□□□□ -1.72
CCDC66-202ENST00000341455 LORP23490 312 aaPredicted RBP4.34□□□□□ -1.72
CCDC66-202ENST00000341455 ATP2B4P23634 1241 aa4.34□□□□□ -1.72
CCDC66-202ENST00000341455 UBE4AQ14139 1066 aa4.34□□□□□ -1.72
CCDC66-202ENST00000341455 PPP2R2DQ66LE6 453 aa4.34□□□□□ -1.72
CCDC66-202ENST00000341455 SMC5Q8IY18 1101 aa4.34□□□□□ -1.72
CCDC66-202ENST00000341455 ZNF333Q96JL9 665 aa4.34□□□□□ -1.72
CCDC66-202ENST00000341455 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.72
CCDC66-202ENST00000341455 GNEQ9Y223 722 aaKnown RBP4.34□□□□□ -1.72
CCDC66-202ENST00000341455 SUGT1Q9Y2Z0 365 aa4.34□□□□□ -1.72
CCDC66-202ENST00000341455 NAV1Q8NEY1 1877 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 F6X3S4 739 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 DDNO94850 711 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 UBTFL1P0CB47 393 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 PIP4K2AP48426 406 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 MEIS3Q99687 375 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 DCTPP1Q9H773 170 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 ATP13A2Q9NQ11 1180 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 SMARCA5O60264 1052 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 S1PR4O95977 384 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 ARID4AP29374 1257 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 IL15P40933 162 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 KIAA2012Q0VF49 1180 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 HSP90AB4PQ58FF6 505 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 SMIM5Q71RC9 77 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 ERC1Q8IUD2 1116 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 DHX37Q8IY37 1157 aaKnown RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 IRF7Q92985 503 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 ZBED3Q96IU2 234 aaPredicted RBP4.33□□□□□ -1.72
CCDC66-202ENST00000341455 PPP1R12CQ9BZL4 782 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 OSBPL3Q9H4L5 887 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 TMEM134Q9H6X4 195 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 PTPN22Q9Y2R2 807 aa4.33□□□□□ -1.72
CCDC66-202ENST00000341455 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ANKRD18BA2A2Z9 1011 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 EYA2O00167 538 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ELL2O00472 640 aaPredicted RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ST8SIA5O15466 376 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 MSS51Q4VC12 460 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 UBE3BQ7Z3V4 1068 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 FBXO33Q7Z6M2 555 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 SYNE4Q8N205 404 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 GREM2Q9H772 168 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 STAP2Q9UGK3 403 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 LIMD1Q9UGP4 676 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ZNRF3Q9ULT6 936 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 MINPP1Q9UNW1 487 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 MANSC4A6NHS7 340 aaPredicted RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ITGA6P23229 1130 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 RPS8P62241 208 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 AIMP1Q12904 312 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 LDLRAD1Q5T700 205 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 DDX46Q7L014 1031 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 FAM89AQ96GI7 184 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 GBA2Q9HCG7 927 aaPredicted RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 TNNQ9UQP3 1299 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 PHIPQ8WWQ0 1821 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 MYO3BQ8WXR4 1341 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 MYO5AQ9Y4I1 1855 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ATP5J2-PTCD1G3V325 749 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 VSIG8P0DPA2 414 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 HDLBPQ00341 1268 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 CYP4F22Q6NT55 531 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ANKRD18AQ8IVF6 992 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 C2orf69Q8N8R5 385 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 AGBL3Q8NEM8 1001 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 RPGRQ92834 1020 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 CSRNP1Q96S65 589 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 GMLQ99445 158 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 TBC1D2Q9BYX2 928 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 PRM3Q9NNZ6 103 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ABT1Q9ULW3 272 aaKnown RBP4.32□□□□□ -1.72
CCDC66-202ENST00000341455 ADGRA2Q96PE1 1338 aa4.32□□□□□ -1.72
CCDC66-202ENST00000341455 A0A0G2JMZ2 1700 aa4.31□□□□□ -1.72
CCDC66-202ENST00000341455 C3orf80F5H4A9 247 aa4.31□□□□□ -1.72
CCDC66-202ENST00000341455 GPR25O00155 361 aa4.31□□□□□ -1.72
CCDC66-202ENST00000341455 PDE8BO95263 885 aa4.31□□□□□ -1.72
CCDC66-202ENST00000341455 GPTP24298 496 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms