RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 DHX8Q14562 1220 aaKnown RBP16.79■□□□□ 0.28
TDP2-201ENST00000341060 MARCH10Q8NA82 808 aaPredicted RBP16.79■□□□□ 0.28
TDP2-201ENST00000341060 CCDC150Q8NCX0 1101 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 CCDC112Q8NEF3 446 aa16.79■□□□□ 0.28
TDP2-201ENST00000341060 WTAPQ15007 396 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 PTPN14Q15678 1187 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 TRIM22Q8IYM9 498 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 CCAR2Q8N163 923 aaKnown RBP16.78■□□□□ 0.28
TDP2-201ENST00000341060 CLIC6Q96NY7 704 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 EP400Q96L91 3159 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 CHRNDQ07001 517 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 RTN1Q16799 776 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 TMTC2Q8N394 836 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 ARID3AQ99856 593 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
TDP2-201ENST00000341060 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
TDP2-201ENST00000341060 ERICH2A1L162 156 aa16.77■□□□□ 0.28
TDP2-201ENST00000341060 GUCY1A2P33402 732 aa16.77■□□□□ 0.28
TDP2-201ENST00000341060 PNOCQ13519 176 aa16.77■□□□□ 0.28
TDP2-201ENST00000341060 RRP12Q5JTH9 1297 aaKnown RBP16.77■□□□□ 0.28
TDP2-201ENST00000341060 TMC6Q7Z403 805 aa16.77■□□□□ 0.28
TDP2-201ENST00000341060 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
TDP2-201ENST00000341060 ELOA2Q8IYF1 753 aaPredicted RBP16.77■□□□□ 0.28
TDP2-201ENST00000341060 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
TDP2-201ENST00000341060 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
TDP2-201ENST00000341060 LRP2BPQ9P2M1 347 aa16.77■□□□□ 0.28
TDP2-201ENST00000341060 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
TDP2-201ENST00000341060 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
TDP2-201ENST00000341060 ZNF831Q5JPB2 1677 aa16.77■□□□□ 0.27
TDP2-201ENST00000341060 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 BTBD18B2RXH4 712 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 SIK1P57059 783 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
TDP2-201ENST00000341060 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
TDP2-201ENST00000341060 ARMCX5Q6P1M9 558 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 PDCL2Q8N4E4 241 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
TDP2-201ENST00000341060 TOMM22Q9NS69 142 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 KCNH3Q9ULD8 1083 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 ZNF804BA4D1E1 1349 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 DEXIO95424 95 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
TDP2-201ENST00000341060 KCNJ6P48051 423 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 FANCCQ00597 558 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 MYL5Q02045 173 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
TDP2-201ENST00000341060 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
TDP2-201ENST00000341060 SFPQP23246 707 aaKnown RBP eCLIP16.75■□□□□ 0.27
TDP2-201ENST00000341060 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
TDP2-201ENST00000341060 PPARAQ07869 468 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 LONRF3Q496Y0 759 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 RILPL1Q5EBL4 403 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 ISM2Q6H9L7 571 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
TDP2-201ENST00000341060 CNNM3Q8NE01 707 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 LAMB1P07942 1786 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 KIF2AO00139 706 aaPredicted RBP16.75■□□□□ 0.27
TDP2-201ENST00000341060 ITPK1Q13572 414 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 ZNF654Q8IZM8 581 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 ZNF592Q92610 1267 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 GJD4Q96KN9 370 aaPredicted RBP16.75■□□□□ 0.27
TDP2-201ENST00000341060 ANAPC4Q9UJX5 808 aa16.75■□□□□ 0.27
TDP2-201ENST00000341060 MYO1BO43795 1136 aa16.74■□□□□ 0.27
TDP2-201ENST00000341060 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
TDP2-201ENST00000341060 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
TDP2-201ENST00000341060 ADGRA1Q86SQ6 560 aa16.74■□□□□ 0.27
TDP2-201ENST00000341060 FANCBQ8NB91 859 aa16.74■□□□□ 0.27
TDP2-201ENST00000341060 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
TDP2-201ENST00000341060 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
TDP2-201ENST00000341060 KCNJ14Q9UNX9 436 aa16.74■□□□□ 0.27
TDP2-201ENST00000341060 COL1A1P02452 1464 aaPredicted RBP16.74■□□□□ 0.27
TDP2-201ENST00000341060 CYP7A1P22680 504 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 E4F1Q66K89 784 aaPredicted RBP16.73■□□□□ 0.27
TDP2-201ENST00000341060 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
TDP2-201ENST00000341060 NRDCO43847 1150 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 PTPREP23469 700 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
TDP2-201ENST00000341060 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 FOXP4Q8IVH2 680 aaPredicted RBP16.73■□□□□ 0.27
TDP2-201ENST00000341060 HOOK1Q9UJC3 728 aaKnown RBP16.73■□□□□ 0.27
TDP2-201ENST00000341060 FBXO2Q9UK22 296 aaPredicted RBP16.73■□□□□ 0.27
TDP2-201ENST00000341060 PCDHA5Q9Y5H7 936 aa16.73■□□□□ 0.27
TDP2-201ENST00000341060 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 SEC23AQ15436 765 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 FAM182BQ5T319 152 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 SDR42E1Q8WUS8 393 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 ESR2Q92731 530 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 TNKSO95271 1327 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 UBASH3AP57075 661 aa16.72■□□□□ 0.27
TDP2-201ENST00000341060 CMTR1Q8N1G2 835 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms