RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
VAPA-201ENST00000340541 PAG1Q9NWQ8 432 aa18.7■□□□□ 0.58
VAPA-201ENST00000340541 PCDH10Q9P2E7 1040 aa18.7■□□□□ 0.58
VAPA-201ENST00000340541 SIPA1L1O43166 1804 aa18.7■□□□□ 0.58
VAPA-201ENST00000340541 TCRBV5S4A2TA0A5A2 114 aa18.69■□□□□ 0.58
VAPA-201ENST00000340541 PDE6AP16499 860 aa18.69■□□□□ 0.58
VAPA-201ENST00000340541 PLCG2P16885 1265 aa18.69■□□□□ 0.58
VAPA-201ENST00000340541 INPP5BP32019 993 aa18.69■□□□□ 0.58
VAPA-201ENST00000340541 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
VAPA-201ENST00000340541 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
VAPA-201ENST00000340541 OTUD7AQ8TE49 926 aaPredicted RBP18.69■□□□□ 0.58
VAPA-201ENST00000340541 PHF20L1A8MW92 1017 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 TLR2O60603 784 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 GNRH1P01148 92 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 SLC9C2Q5TAH2 1124 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 TSHZ3Q63HK5 1081 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 ZSCAN29Q8IWY8 852 aaPredicted RBP18.68■□□□□ 0.58
VAPA-201ENST00000340541 RIOK1Q9BRS2 568 aaKnown RBP18.68■□□□□ 0.58
VAPA-201ENST00000340541 MYH7P12883 1935 aa18.68■□□□□ 0.58
VAPA-201ENST00000340541 IRF6O14896 467 aa18.67■□□□□ 0.58
VAPA-201ENST00000340541 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
VAPA-201ENST00000340541 GCC1Q96CN9 775 aa18.67■□□□□ 0.58
VAPA-201ENST00000340541 FLT1P17948 1338 aa18.67■□□□□ 0.58
VAPA-201ENST00000340541 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
VAPA-201ENST00000340541 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
VAPA-201ENST00000340541 HTTP42858 3142 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 BTBD19C9JJ37 291 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 IGHDP01880 384 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 KIF22Q14807 665 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 SLFNL1Q499Z3 407 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 NOL9Q5SY16 702 aaKnown RBP18.66■□□□□ 0.58
VAPA-201ENST00000340541 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
VAPA-201ENST00000340541 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 TBC1D12O60347 775 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 CHGBP05060 677 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 ADD2P35612 726 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 PRMT2P55345 433 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 ANKRD45Q5TZF3 282 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 CERS3Q8IU89 383 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 TTC41PQ6P2S7 1318 aa18.65■□□□□ 0.58
VAPA-201ENST00000340541 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
VAPA-201ENST00000340541 RBBP6Q7Z6E9 1792 aaKnown RBP18.64■□□□□ 0.57
VAPA-201ENST00000340541 FAM196BA6NMK8 535 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
VAPA-201ENST00000340541 CAP1Q01518 475 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 ANKRD23Q86SG2 305 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 ZNF333Q96JL9 665 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 TMEM106CQ9BVX2 250 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.57
VAPA-201ENST00000340541 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 MYH1P12882 1939 aa18.64■□□□□ 0.57
VAPA-201ENST00000340541 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
VAPA-201ENST00000340541 MAGEB6P1A0A0J9YX57 407 aa18.63■□□□□ 0.57
VAPA-201ENST00000340541 LACTBP83111 547 aaPredicted RBP18.63■□□□□ 0.57
VAPA-201ENST00000340541 SLC9C1Q4G0N8 1177 aa18.63■□□□□ 0.57
VAPA-201ENST00000340541 DHX36Q9H2U1 1008 aaKnown RBP18.63■□□□□ 0.57
VAPA-201ENST00000340541 MX1P20591 662 aa18.62■□□□□ 0.57
VAPA-201ENST00000340541 UBE3CQ15386 1083 aa18.62■□□□□ 0.57
VAPA-201ENST00000340541 C17orf99Q6UX52 265 aa18.62■□□□□ 0.57
VAPA-201ENST00000340541 METTL16Q86W50 562 aaKnown RBP18.62■□□□□ 0.57
VAPA-201ENST00000340541 SCYL3Q8IZE3 742 aa18.62■□□□□ 0.57
VAPA-201ENST00000340541 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.62■□□□□ 0.57
VAPA-201ENST00000340541 PI4KBQ9UBF8 816 aa18.62■□□□□ 0.57
VAPA-201ENST00000340541 PALD1Q9ULE6 856 aa18.62■□□□□ 0.57
VAPA-201ENST00000340541 PHIPQ8WWQ0 1821 aa18.61■□□□□ 0.57
VAPA-201ENST00000340541 CXCL11O14625 94 aa18.61■□□□□ 0.57
VAPA-201ENST00000340541 RRP1BQ14684 758 aaKnown RBP18.61■□□□□ 0.57
VAPA-201ENST00000340541 LCORLQ8N3X6 602 aa18.61■□□□□ 0.57
VAPA-201ENST00000340541 KBTBD3Q8NAB2 608 aa18.61■□□□□ 0.57
VAPA-201ENST00000340541 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
VAPA-201ENST00000340541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
VAPA-201ENST00000340541 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
VAPA-201ENST00000340541 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
VAPA-201ENST00000340541 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
VAPA-201ENST00000340541 NAV1Q8NEY1 1877 aa18.6■□□□□ 0.57
VAPA-201ENST00000340541 CTNND1O60716 968 aaKnown RBP18.6■□□□□ 0.57
VAPA-201ENST00000340541 GLRX3O76003 335 aaKnown RBP18.6■□□□□ 0.57
VAPA-201ENST00000340541 USP5P45974 858 aa18.6■□□□□ 0.57
VAPA-201ENST00000340541 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
VAPA-201ENST00000340541 HERC5Q9UII4 1024 aaKnown RBP18.6■□□□□ 0.57
VAPA-201ENST00000340541 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
VAPA-201ENST00000340541 CENPFP49454 3210 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 PDHXO00330 501 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 ERC2O15083 957 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 MBD4O95243 580 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 PTPRAP18433 802 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 EN2P19622 333 aaPredicted RBP18.59■□□□□ 0.57
VAPA-201ENST00000340541 HOXD10P28358 340 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 FOXP4Q8IVH2 680 aaPredicted RBP18.59■□□□□ 0.57
VAPA-201ENST00000340541 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
VAPA-201ENST00000340541 PDE1AP54750 535 aa18.58■□□□□ 0.56
VAPA-201ENST00000340541 ZSCAN25Q6NSZ9 544 aa18.58■□□□□ 0.56
VAPA-201ENST00000340541 CRNKL1Q9BZJ0 848 aaKnown RBP18.58■□□□□ 0.56
VAPA-201ENST00000340541 LNPKQ9C0E8 428 aa18.58■□□□□ 0.56
VAPA-201ENST00000340541 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.56
VAPA-201ENST00000340541 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms