RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 NAPAP54920 295 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 SCRN1Q12765 414 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 SEPT7Q16181 437 aaKnown RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 FAM177A1Q8N128 213 aaPredicted RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 FANCBQ8NB91 859 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 ZSCAN10Q96SZ4 725 aaPredicted RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 RBSNQ9H1K0 784 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 SH2D4AQ9H788 454 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 CETN2P41208 172 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 PTPN14Q15678 1187 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 IL17RAQ96F46 866 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 STRBPQ96SI9 672 aaKnown RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 STK36Q9NRP7 1315 aa8.65□□□□□ -1.02
HIPK1-201ENST00000340480 CHD2O14647 1828 aaKnown RBP8.65□□□□□ -1.02
HIPK1-201ENST00000340480 TRAPPC10P48553 1259 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 GRAPQ13588 217 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 RASGRF1Q13972 1273 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 KRT25Q7Z3Z0 450 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 ZNF397Q8NF99 534 aaPredicted RBP8.65□□□□□ -1.03
HIPK1-201ENST00000340480 KIF18AQ8NI77 898 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 GRAPLQ8TC17 118 aaPredicted RBP8.65□□□□□ -1.03
HIPK1-201ENST00000340480 DNAJC25Q9H1X3 360 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 RCOR1Q9UKL0 485 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 MED1Q15648 1581 aaPredicted RBP8.65□□□□□ -1.03
HIPK1-201ENST00000340480 M0R2C6 588 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 PPP1R12BO60237 982 aaPredicted RBP8.65□□□□□ -1.03
HIPK1-201ENST00000340480 HSP90B2PQ58FF3 399 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 CC2D2BQ6DHV5 1058 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.03
HIPK1-201ENST00000340480 CMA1P23946 247 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 MCAMP43121 646 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 MYL5Q02045 173 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 ZHX3Q9H4I2 956 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 TNKSO95271 1327 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 SH2B2O14492 632 aaPredicted RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 GYG1P46976 350 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 PLCD1P51178 756 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 WDR78Q5VTH9 848 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 DPP8Q6V1X1 898 aaPredicted RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 NOSTRINQ8IVI9 506 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 MLKLQ8NB16 471 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 hCG_1984214I3L0E3 225 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 CALRP27797 417 aaKnown RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 ZNF713Q8N859 430 aaPredicted RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 KAZALD1Q96I82 304 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 PKP1Q13835 747 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 TIGD1Q96MW7 591 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 PSMA7O14818 248 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 MRPL12P52815 198 aaKnown RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 TRIML1Q8N9V2 468 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 PAXBP1Q9Y5B6 917 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 PEAK1Q9H792 1746 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 STXBP4Q6ZWJ1 553 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 MPNDQ8N594 471 aa8.64□□□□□ -1.03
HIPK1-201ENST00000340480 FOXP1Q9H334 677 aaPredicted RBP8.64□□□□□ -1.03
HIPK1-201ENST00000340480 BCL9O00512 1426 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 USP17L21D6R901 530 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 MYCNP04198 464 aaPredicted RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 MARCKSP29966 332 aaPredicted RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 STAT6P42226 847 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 STAG1Q8WVM7 1258 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 AATFQ9NY61 560 aaKnown RBP eCLIP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 HOXA7P31268 230 aaPredicted RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 IQCEQ6IPM2 695 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 HEATR3Q7Z4Q2 680 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 PUS7LQ9H0K6 701 aaKnown RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 PIH1D3Q9NQM4 214 aaKnown RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 PPP6R2O75170 966 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 CAMTA2O94983 1202 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 DDIT3P35638 169 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 TERF1P54274 439 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 H0YIN7 160 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 GADD45BO75293 160 aaPredicted RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 TOB2Q14106 344 aaPredicted RBP8.63□□□□□ -1.03
HIPK1-201ENST00000340480 DTHD1Q6ZMT9 781 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 GPT2Q8TD30 523 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 POLD1P28340 1107 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 NF2P35240 595 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 SMARCC2Q8TAQ2 1214 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 USP28Q96RU2 1077 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 IMPACTQ9P2X3 320 aa8.63□□□□□ -1.03
HIPK1-201ENST00000340480 FMNL1O95466 1100 aaPredicted RBP8.62□□□□□ -1.03
HIPK1-201ENST00000340480 AOPEPQ8N6M6 819 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 CASP7P55210 303 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 RESTQ13127 1097 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 SLC39A14Q15043 492 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 ARHGAP29Q52LW3 1261 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
HIPK1-201ENST00000340480 KRT27Q7Z3Y8 459 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms