RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 KDM3BQ7LBC6 1761 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 HSPD1P10809 573 aaKnown RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 ARHGAP25P42331 645 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 SARSP49591 514 aaKnown RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 TFCP2Q12800 502 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 STIM1Q13586 685 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 EPHA10Q5JZY3 1008 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 NUTM2AQ8IVF1 878 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 CPLX3Q8WVH0 158 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 EHD4Q9H223 541 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 FECHP22830 423 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 HOXC9P31274 260 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 NT5DC1Q5TFE4 455 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 TTLL5Q6EMB2 1281 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 PRPF38AQ8NAV1 312 aaKnown RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 MLKLQ8NB16 471 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 ACRBPQ8NEB7 543 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 CCDC148Q8NFR7 591 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 A1CFQ9NQ94 594 aaKnown RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 HELLSQ9NRZ9 838 aa10.68□□□□□ -0.7
NECAP1-201ENST00000339754 TTF2Q9UNY4 1162 aaKnown RBP10.68□□□□□ -0.7
NECAP1-201ENST00000339754 USP8P40818 1118 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 FNTAP49354 379 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 MORC3Q14149 939 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 SLC9C2Q5TAH2 1124 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 JMYQ8N9B5 988 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 DBNDD2Q9BQY9 259 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 PALLDQ8WX93 1383 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 MFAP3LO75121 409 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 INPP5BP32019 993 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 PPFIBP1Q86W92 1011 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 FAM76AQ8TAV0 307 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 LTV1Q96GA3 475 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-201ENST00000339754 COPRSQ9NQ92 184 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 MYO1AQ9UBC5 1043 aa10.67□□□□□ -0.7
NECAP1-201ENST00000339754 RFX5P48382 616 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-201ENST00000339754 AKAP17AQ02040 695 aaKnown RBP10.66□□□□□ -0.7
NECAP1-201ENST00000339754 DDR1Q08345 913 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 BCAS4Q8TDM0 211 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 AIFM3Q96NN9 605 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 NBPF3Q9H094 633 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
NECAP1-201ENST00000339754 GRIN2DO15399 1336 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 CCDC189A1A4V9 331 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 BTBD11A6QL63 1104 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 KCNA4P22459 653 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 CASP14P31944 242 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 PPFIA1Q13136 1202 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 MAP9Q49MG5 647 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 TRAPPC11Q7Z392 1133 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 PROSER2Q86WR7 435 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-201ENST00000339754 RAB11FIP4Q86YS3 637 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 USHBP1Q8N6Y0 703 aa10.66□□□□□ -0.7
NECAP1-201ENST00000339754 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
NECAP1-201ENST00000339754 MCM3P25205 808 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 FXR1P51114 621 aaKnown RBP eCLIP10.65□□□□□ -0.7
NECAP1-201ENST00000339754 ERVK-24P63145 666 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 PTPN12Q05209 780 aaKnown RBP10.65□□□□□ -0.7
NECAP1-201ENST00000339754 POSTNQ15063 836 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 VPS37DQ86XT2 251 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 STAG1Q8WVM7 1258 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 GDAP1L1Q96MZ0 367 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 CARD10Q9BWT7 1032 aa10.65□□□□□ -0.7
NECAP1-201ENST00000339754 TARSL2A2RTX5 802 aaKnown RBP10.65□□□□□ -0.71
NECAP1-201ENST00000339754 PRAMEF22A3QJZ6 481 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 GOLGA6CA6NDK9 693 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 GOLGA8BA8MQT2 603 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.71
NECAP1-201ENST00000339754 C21orf2O43822 256 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 GYPCP04921 128 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 GOLGA6DP0CG33 693 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 MYBL2P10244 700 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 GPTP24298 496 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 SPECC1Q5M775 1068 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 CCNI2Q6ZMN8 369 aaPredicted RBP10.65□□□□□ -0.71
NECAP1-201ENST00000339754 MMS19Q96T76 1030 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 SH3GL2Q99962 352 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 JPH2Q9BR39 696 aaPredicted RBP10.65□□□□□ -0.71
NECAP1-201ENST00000339754 CAPS2Q9BXY5 557 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 GOLGA6AQ9NYA3 693 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 DACH1Q9UI36 760 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 WWC3Q9ULE0 1092 aa10.65□□□□□ -0.71
NECAP1-201ENST00000339754 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-201ENST00000339754 PLCD1P51178 756 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 TMTC1Q8IUR5 882 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 CCDC51Q96ER9 411 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 CABS1Q96KC9 395 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 RABEP2Q9H5N1 569 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 SEC31BQ9NQW1 1179 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 CAPN7Q9Y6W3 813 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms