RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
LST1-203ENST00000339530 PPIP5K2O43314 1243 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 C21orf2O43822 256 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 RHBDL3P58872 404 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 PKP1Q13835 747 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 WTAPQ15007 396 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 PPP2R5BQ15173 497 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 DACT2Q5SW24 774 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 C12orf60Q5U649 245 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 APOA5Q6Q788 366 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
LST1-203ENST00000339530 TEKT1Q969V4 418 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 DBNDD1Q9H9R9 158 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 MCM9Q9NXL9 1143 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 TCHHQ07283 1943 aa12.99□□□□□ -0.33
LST1-203ENST00000339530 COL2A1P02458 1487 aaPredicted RBP12.98□□□□□ -0.33
LST1-203ENST00000339530 FLT1P17948 1338 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 PTPDC1A2A3K4 754 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 ZBTB43O43298 467 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 F13A1P00488 732 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 METAP2P50579 478 aaKnown RBP eCLIP12.98□□□□□ -0.33
LST1-203ENST00000339530 FSTL1Q12841 308 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 AOC3Q16853 763 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 SKOR2Q2VWA4 1001 aaPredicted RBP12.98□□□□□ -0.33
LST1-203ENST00000339530 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
LST1-203ENST00000339530 LARP1BQ659C4 914 aaKnown RBP12.98□□□□□ -0.33
LST1-203ENST00000339530 FAM184AQ8NB25 1140 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 ZDHHC15Q96MV8 337 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 MTMR6Q9Y217 621 aa12.98□□□□□ -0.33
LST1-203ENST00000339530 TNKSO95271 1327 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 CPLX1O14810 134 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
LST1-203ENST00000339530 NFXL1Q6ZNB6 911 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 TGFBRAP1Q8WUH2 860 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
LST1-203ENST00000339530 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 BRPF3Q9ULD4 1205 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 NAP1L2Q9ULW6 460 aaPredicted RBP12.97□□□□□ -0.33
LST1-203ENST00000339530 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
LST1-203ENST00000339530 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
LST1-203ENST00000339530 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 GOLGA8AA7E2F4 631 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
LST1-203ENST00000339530 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
LST1-203ENST00000339530 CALM1P0DP23 149 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 CALM2P0DP24 149 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 CALM3P0DP25 149 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
LST1-203ENST00000339530 SEC23AQ15436 765 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 C9orf131Q5VYM1 1079 aa12.96□□□□□ -0.33
LST1-203ENST00000339530 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
LST1-203ENST00000339530 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.34
LST1-203ENST00000339530 PLIN4Q96Q06 1357 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
LST1-203ENST00000339530 JAK2O60674 1132 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 DDAH1O94760 285 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 CRKP46108 304 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 MMP14P50281 582 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 C16orf86Q6ZW13 317 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 TTC6Q86TZ1 520 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 MAPKAPK5Q8IW41 473 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 ZSCAN16Q9H4T2 348 aaPredicted RBP12.95□□□□□ -0.34
LST1-203ENST00000339530 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
LST1-203ENST00000339530 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
LST1-203ENST00000339530 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
LST1-203ENST00000339530 COL4A5P29400 1685 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 H3BQV1 296 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
LST1-203ENST00000339530 CYP2D6P10635 497 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
LST1-203ENST00000339530 IFIT1BQ5T764 474 aaKnown RBP12.94□□□□□ -0.34
LST1-203ENST00000339530 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 ZNF654Q8IZM8 581 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 TMEM87AQ8NBN3 555 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 NCOA5Q9HCD5 579 aaKnown RBP12.94□□□□□ -0.34
LST1-203ENST00000339530 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
LST1-203ENST00000339530 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
LST1-203ENST00000339530 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms