RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CTAGE6Q86UF2 777 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 CTAGE4Q8IX94 777 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 IGSF22Q8N9C0 903 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 PPM1EQ8WY54 764 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.19■■□□□ 1.3
RUNX3-202ENST00000338888 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 SERTAD1Q9UHV2 236 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 HOOK1Q9UJC3 728 aaKnown RBP23.19■■□□□ 1.3
RUNX3-202ENST00000338888 RGPD2P0DJD1 1756 aa23.19■■□□□ 1.3
RUNX3-202ENST00000338888 GRIN1Q05586 938 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 STK11IPQ8N1F8 1099 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 NOA1Q8NC60 698 aaKnown RBP23.18■■□□□ 1.3
RUNX3-202ENST00000338888 DENND2AQ9ULE3 1009 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 A0A1B0GTH6 734 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 POLR2DO15514 142 aaKnown RBP23.18■■□□□ 1.3
RUNX3-202ENST00000338888 KRI1Q8N9T8 703 aaKnown RBP23.18■■□□□ 1.3
RUNX3-202ENST00000338888 GBP3Q9H0R5 595 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 DACH1Q9UI36 760 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 SLIT3O75094 1523 aa23.18■■□□□ 1.3
RUNX3-202ENST00000338888 GUCY2CP25092 1073 aa23.17■■□□□ 1.3
RUNX3-202ENST00000338888 METAP2P50579 478 aaKnown RBP eCLIP23.17■■□□□ 1.3
RUNX3-202ENST00000338888 MORC3Q14149 939 aa23.17■■□□□ 1.3
RUNX3-202ENST00000338888 ACRBPQ8NEB7 543 aa23.17■■□□□ 1.3
RUNX3-202ENST00000338888 UBE2Q2LH0YL09 131 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 TUBB2AQ13885 445 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 CHRNA2Q15822 529 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 RASGRP2Q7LDG7 609 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 TUBB2BQ9BVA1 445 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 ZNF213O14771 459 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 TUBB4BP68371 445 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 NAA15Q9BXJ9 866 aaKnown RBP23.16■■□□□ 1.3
RUNX3-202ENST00000338888 BRMS1Q9HCU9 246 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 MED4Q9NPJ6 270 aa23.16■■□□□ 1.3
RUNX3-202ENST00000338888 GEMIN8Q9NWZ8 242 aaKnown RBP23.16■■□□□ 1.3
RUNX3-202ENST00000338888 DCCP43146 1447 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 ZMYM6O95789 1325 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 RNF40O75150 1001 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 SARSP49591 514 aaKnown RBP23.15■■□□□ 1.3
RUNX3-202ENST00000338888 LRRC24Q50LG9 513 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 NKX2-3Q8TAU0 364 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 NAPGQ99747 312 aaPredicted RBP23.15■■□□□ 1.3
RUNX3-202ENST00000338888 ACBD3Q9H3P7 528 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 TRDNQ13061 729 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 SEC31BQ9NQW1 1179 aa23.15■■□□□ 1.3
RUNX3-202ENST00000338888 PPFIA4O75335 1185 aa23.14■■□□□ 1.3
RUNX3-202ENST00000338888 CASP14P31944 242 aa23.14■■□□□ 1.3
RUNX3-202ENST00000338888 STX17P56962 302 aa23.14■■□□□ 1.3
RUNX3-202ENST00000338888 ZNF594Q96JF6 807 aaPredicted RBP23.14■■□□□ 1.3
RUNX3-202ENST00000338888 RNF216Q9NWF9 866 aaPredicted RBP23.14■■□□□ 1.3
RUNX3-202ENST00000338888 CASP7P55210 303 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 PIP4K2BP78356 416 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 TRIM29Q14134 588 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 NT5DC1Q5TFE4 455 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 NCAPH2Q6IBW4 605 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 KLHL10Q6JEL2 608 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 APTXQ7Z2E3 356 aaKnown RBP23.14■■□□□ 1.29
RUNX3-202ENST00000338888 MICU3Q86XE3 530 aa23.14■■□□□ 1.29
RUNX3-202ENST00000338888 WHAMMP3Q1A5X7 153 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 PUS7LQ9H0K6 701 aaKnown RBP23.13■■□□□ 1.29
RUNX3-202ENST00000338888 SENP2Q9HC62 589 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 NLRP2Q9NX02 1062 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 MFAP3LO75121 409 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 SYF2O95926 243 aaKnown RBP23.13■■□□□ 1.29
RUNX3-202ENST00000338888 PLCD1P51178 756 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 FOXO4P98177 505 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 SART3Q15020 963 aaKnown RBP23.13■■□□□ 1.29
RUNX3-202ENST00000338888 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 AFAP1L1Q8TED9 768 aa23.13■■□□□ 1.29
RUNX3-202ENST00000338888 LOC102724159A0A0B4J2E5 919 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 CDKL5O76039 1030 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 ATP2B1P20020 1258 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 PWP2Q15269 919 aaKnown RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 ANGEL1Q9UNK9 670 aaKnown RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 AKAP17AQ02040 695 aaKnown RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 LRP10Q7Z4F1 713 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 ELOA2Q8IYF1 753 aaPredicted RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 ZNF496Q96IT1 587 aaPredicted RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 GPR108Q9NPR9 543 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 NWD2Q9ULI1 1742 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 IL15P40933 162 aaPredicted RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 FXR1P51114 621 aaKnown RBP eCLIP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 CPLX2Q6PUV4 134 aaKnown RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 PAXIP1Q6ZW49 1069 aaPredicted RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 TICAM2Q86XR7 235 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 DEF6Q9H4E7 631 aa23.12■■□□□ 1.29
RUNX3-202ENST00000338888 TTF2Q9UNY4 1162 aaKnown RBP23.12■■□□□ 1.29
RUNX3-202ENST00000338888 CPDO75976 1380 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 DNAJC21Q5F1R6 531 aaKnown RBP23.11■■□□□ 1.29
RUNX3-202ENST00000338888 CYB5R4Q7L1T6 521 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 RIN2Q8WYP3 895 aaPredicted RBP23.11■■□□□ 1.29
RUNX3-202ENST00000338888 MYO6Q9UM54 1294 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 OVOS2A0A0G2JMS6 1433 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 E2F4Q16254 413 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 EFCAB13Q8IY85 973 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 MYL10Q9BUA6 226 aa23.11■■□□□ 1.29
RUNX3-202ENST00000338888 TUBBP07437 444 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms