RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 SAPCD2Q86UD0 394 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 DNAJC2Q99543 621 aaKnown RBP12.56□□□□□ -0.4
RTN3-201ENST00000338850 GREM2Q9H772 168 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 KCND1Q9NSA2 647 aa12.56□□□□□ -0.4
RTN3-201ENST00000338850 A0A1B0GUL7 405 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 PTPDC1A2A3K4 754 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 E7EWF7 191 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 JAK2O60674 1132 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 YEATS4O95619 227 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 HSPA8P11142 646 aaKnown RBP12.55□□□□□ -0.4
RTN3-201ENST00000338850 ATP2B4P23634 1241 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 ZNF75DP51815 510 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 BRAPQ7Z569 592 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 FERMT3Q86UX7 667 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 BICD2Q8TD16 824 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 APPBP2Q92624 585 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
RTN3-201ENST00000338850 BPIFA3Q9BQP9 254 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 KCNF1Q9H3M0 494 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 ZNF408Q9H9D4 720 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 SCN9AQ15858 1988 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 NID2Q14112 1375 aa12.55□□□□□ -0.4
RTN3-201ENST00000338850 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
RTN3-201ENST00000338850 G3V3G9 751 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 AP5Z1O43299 807 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 CTDNEP1O95476 244 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
RTN3-201ENST00000338850 LBX1P52954 281 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 FAM160A1Q05DH4 1040 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
RTN3-201ENST00000338850 GRM1Q13255 1194 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
RTN3-201ENST00000338850 ANO6Q4KMQ2 910 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 ZSCAN25Q6NSZ9 544 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 HHIPL1Q96JK4 782 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 POLR3EQ9NVU0 708 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
RTN3-201ENST00000338850 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
RTN3-201ENST00000338850 GOLIM4O00461 696 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 AOC2O75106 756 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 NR1I2O75469 434 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 PDIA3P30101 505 aaKnown RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 ZNF165P49910 485 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 IQCB1Q15051 598 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 IMMTQ16891 758 aaKnown RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 RSBN1LQ6PCB5 846 aaPredicted RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 CCDC129Q6ZRS4 1044 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 GMLQ99445 158 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 TTC12Q9H892 705 aaPredicted RBP12.53□□□□□ -0.4
RTN3-201ENST00000338850 ANO10Q9NW15 660 aa12.53□□□□□ -0.4
RTN3-201ENST00000338850 ADM5C9JUS6 153 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 CTIFO43310 598 aaKnown RBP12.52□□□□□ -0.41
RTN3-201ENST00000338850 MAP2K2P36507 400 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 KCNJ6P48051 423 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 FGD1P98174 961 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 TTF1Q15361 905 aaPredicted RBP12.52□□□□□ -0.41
RTN3-201ENST00000338850 ADALQ6DHV7 355 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 AGBL3Q8NEM8 1001 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 DCPSQ96C86 337 aaKnown RBP12.52□□□□□ -0.41
RTN3-201ENST00000338850 MTA3Q9BTC8 594 aa12.52□□□□□ -0.41
RTN3-201ENST00000338850 MYO1BO43795 1136 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
RTN3-201ENST00000338850 ITGA6P23229 1130 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 STK3Q13188 491 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
RTN3-201ENST00000338850 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 TIGD1Q96MW7 591 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.41
RTN3-201ENST00000338850 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
RTN3-201ENST00000338850 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 ASTN2O75129 1339 aaPredicted RBP12.51□□□□□ -0.41
RTN3-201ENST00000338850 A0A1B0GUL6 1792 aa12.51□□□□□ -0.41
RTN3-201ENST00000338850 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 TUBB4AP04350 444 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 IGHMBP2P38935 993 aaKnown RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 HUNKP57058 714 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 ALX1Q15699 326 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms