RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 CCDC196A0A1B0GTZ2 297 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 MMP1P03956 469 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 CEP135Q66GS9 1140 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 SRCAPQ6ZRS2 3230 aa17.37■□□□□ 0.37
TNFSF13-201ENST00000338784 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 GUCY1A2P33402 732 aa17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 RCAN1P53805 252 aa17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 ITPK1Q13572 414 aa17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 DHX8Q14562 1220 aaKnown RBP17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 KRI1Q8N9T8 703 aaKnown RBP17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 CCDC94Q9BW85 323 aaPredicted RBP17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 KCND1Q9NSA2 647 aa17.36■□□□□ 0.37
TNFSF13-201ENST00000338784 USP27XA6NNY8 438 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 BTBD18B2RXH4 712 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 DEXIO95424 95 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 CYP7A1P22680 504 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 PPARAQ07869 468 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 ISM2Q6H9L7 571 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 DIS3L2Q8IYB7 885 aaKnown RBP17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 CCDC150Q8NCX0 1101 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 CCDC112Q8NEF3 446 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 KCNH3Q9ULD8 1083 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 KAT6BQ8WYB5 2073 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 DOCK2Q92608 1830 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 PNOCQ13519 176 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 NYAP1Q6ZVC0 841 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 CRACR2BQ8N4Y2 399 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 ANKRD7Q92527 254 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 FOXP1Q9H334 677 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
TNFSF13-201ENST00000338784 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 LONRF3Q496Y0 759 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 RILPL1Q5EBL4 403 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 KRBA2Q6ZNG9 492 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 CCAR2Q8N163 923 aaKnown RBP17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 FANCBQ8NB91 859 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 CNNM3Q8NE01 707 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 ARID3AQ99856 593 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 UBAC1Q9BSL1 405 aa17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
TNFSF13-201ENST00000338784 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 FANCCQ00597 558 aa17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 SYCP1Q15431 976 aa17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 ELOA2Q8IYF1 753 aaPredicted RBP17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 ZNF654Q8IZM8 581 aa17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 ZNF592Q92610 1267 aa17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 ABCF2Q9UG63 623 aa17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 KCNJ14Q9UNX9 436 aa17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.37
TNFSF13-201ENST00000338784 EP400Q96L91 3159 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 SFPQP23246 707 aaKnown RBP eCLIP17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 TOB1P50616 345 aaPredicted RBP17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 MYL5Q02045 173 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 OLFM4Q6UX06 510 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 ADGRA1Q86SQ6 560 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 METTL16Q86W50 562 aaKnown RBP17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 CCDC82Q8N4S0 544 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 NUP133Q8WUM0 1156 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 RAI14Q9P0K7 980 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 HOOK1Q9UJC3 728 aaKnown RBP17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 ANAPC4Q9UJX5 808 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 RREB1Q92766 1687 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 ZNF804BA4D1E1 1349 aa17.33■□□□□ 0.36
TNFSF13-201ENST00000338784 BCL9LQ86UU0 1499 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 MINDY4BA8MYZ0 360 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 ARMCX5Q6P1M9 558 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 PDCL2Q8N4E4 241 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 SDR42E1Q8WUS8 393 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 ESR2Q92731 530 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 HSD3B7Q9H2F3 369 aa17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 TRMT1Q9NXH9 659 aaKnown RBP17.32■□□□□ 0.36
TNFSF13-201ENST00000338784 NRDCO43847 1150 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 CMTR1Q8N1G2 835 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 CBFA2T2O43439 604 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 MYO1BO43795 1136 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 ATP1A3P13637 1013 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 PTPREP23469 700 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 GYG1P46976 350 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 UBE4AQ14139 1066 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 FBXO2Q9UK22 296 aaPredicted RBP17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 PCDHA5Q9Y5H7 936 aa17.31■□□□□ 0.36
TNFSF13-201ENST00000338784 KIF2AO00139 706 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 NCBP1Q09161 790 aaKnown RBP17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 SEC23AQ15436 765 aa17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 FOXP4Q8IVH2 680 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 SMARCC1Q92922 1105 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms