RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
MS4A4A-201ENST00000337908 TNKSO95271 1327 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 TSPY2A6NKD2 308 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 USP17L8P0C7I0 530 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 RCAN1P53805 252 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 AOC3Q16853 763 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 C12orf60Q5U649 245 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 RAB11FIP4Q86YS3 637 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 C7orf43Q8WVR3 580 aa12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 ZSCAN10Q96SZ4 725 aaPredicted RBP12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
MS4A4A-201ENST00000337908 CDK5RAP2Q96SN8 1893 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 MBD3O95983 291 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 FGRP09769 529 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CALM1P0DP23 149 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CALM2P0DP24 149 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CALM3P0DP25 149 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CYP2D6P10635 497 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 GSE1Q14687 1217 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 RTN1Q16799 776 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CDC37L1Q7L3B6 337 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CATIPQ7Z7H3 387 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 ZNF444Q8N0Y2 327 aaPredicted RBP12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 WASF1Q92558 559 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 SAP30BPQ9UHR5 308 aaKnown RBP12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 TACC3Q9Y6A5 838 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 MYH1P12882 1939 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 FOCADQ5VW36 1801 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 DTNBO60941 627 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 PRDM1O75626 825 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 CTDNEP1O95476 244 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 SCNN1DP51172 638 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 RBM5P52756 815 aaKnown RBP eCLIP12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 FOSBP53539 338 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 KRT85P78386 507 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 TRIM22Q8IYM9 498 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 ZNF654Q8IZM8 581 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 NUP133Q8WUM0 1156 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 PSMD1Q99460 953 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
MS4A4A-201ENST00000337908 FLT1P17948 1338 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 HDLBPQ00341 1268 aaKnown RBP12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 TRIM29Q14134 588 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 R3HDM1Q15032 1099 aaKnown RBP12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 TTC6Q86TZ1 520 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 CCDC144CPQ8IYA2 1237 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 LMBRD1Q9NUN5 540 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
MS4A4A-201ENST00000337908 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 NID2Q14112 1375 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 RXRAP19793 462 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 CRKP46108 304 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 RHBDL3P58872 404 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 KLHL40Q2TBA0 621 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 MXD3Q9BW11 206 aa12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
MS4A4A-201ENST00000337908 FIBPO43427 364 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 DDAH1O94760 285 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 HLA-DOAP06340 250 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 TFAP4Q01664 338 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 PICALMQ13492 652 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 SEC23AQ15436 765 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 DDX60LQ5H9U9 1706 aaKnown RBP12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 DACT2Q5SW24 774 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 KIAA0825Q8IV33 1275 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 NIM1KQ8IY84 436 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 ENAHQ8N8S7 591 aaPredicted RBP12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 GZF1Q9H116 711 aaPredicted RBP12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
MS4A4A-201ENST00000337908 CNPY2Q9Y2B0 182 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms