RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 NDUFAB1O14561 156 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 ARHGAP6O43182 974 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 STRN3Q13033 797 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 TMCO4Q5TGY1 634 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 AP1ARQ63HQ0 302 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
HLCS-201ENST00000336648 SIRT1Q96EB6 747 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 ARHGEF10LQ9HCE6 1279 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 IQSEC3Q9UPP2 1182 aaPredicted RBP14.56□□□□□ -0.08
HLCS-201ENST00000336648 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 SYNRGQ9UMZ2 1314 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 PLS1Q14651 629 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 MCUR1Q96AQ8 359 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 PFDN4Q9NQP4 134 aa14.56□□□□□ -0.08
HLCS-201ENST00000336648 PPFIA1Q13136 1202 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 CCDC51Q96ER9 411 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 PPP2R5EQ16537 467 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 CSGALNACT2Q8N6G5 542 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 VCX3AQ9NNX9 186 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 GOLGA6CA6NDK9 693 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 FLOT1O75955 427 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 GOLGA6DP0CG33 693 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 LETM2Q2VYF4 491 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 VEZTQ9HBM0 779 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 GOLGA6AQ9NYA3 693 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 PA2G4Q9UQ80 394 aaKnown RBP14.55□□□□□ -0.08
HLCS-201ENST00000336648 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 PLB1Q6P1J6 1458 aa14.55□□□□□ -0.08
HLCS-201ENST00000336648 PPFIA4O75335 1185 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 ARHGEF2Q92974 986 aaKnown RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 DDX21Q9NR30 783 aaKnown RBP eCLIP14.54□□□□□ -0.08
HLCS-201ENST00000336648 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 NLRP12P59046 1061 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 CHRNA2Q15822 529 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 SDCCAG8Q86SQ7 713 aaPredicted RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 RNF10Q8N5U6 811 aaKnown RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 HSPA1LP34931 641 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 ANGEL1Q9UNK9 670 aaKnown RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 MBD4O95243 580 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 GNA14O95837 355 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 GCKP35557 465 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 ZNF174Q15697 407 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 LRCH2Q5VUJ6 765 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 DUOX2Q9NRD8 1548 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 GRIN2AQ12879 1464 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 I3L4J1 428 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 BCRP11274 1271 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 YWHAEP62258 255 aaKnown RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 FANCCQ00597 558 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 MTHFSDQ2M296 383 aaKnown RBP14.54□□□□□ -0.08
HLCS-201ENST00000336648 WDR7Q9Y4E6 1490 aa14.54□□□□□ -0.08
HLCS-201ENST00000336648 TRPM2O94759 1503 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 EYA2O00167 538 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 GEN1Q17RS7 908 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 MIGA1Q8NAN2 632 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 APPBP2Q92624 585 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 A0A1B0GVL5 298 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 PUM3Q15397 648 aaKnown RBP14.53□□□□□ -0.08
HLCS-201ENST00000336648 ARHGEF35A5YM69 484 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 RASSF2P50749 326 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 CFAP221Q4G0U5 840 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 MAP3K21Q5TCX8 1036 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 TEX11Q8IYF3 940 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 PRPF31Q8WWY3 499 aaKnown RBP14.53□□□□□ -0.08
HLCS-201ENST00000336648 TXNDC9O14530 226 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 IRX4P78413 519 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 HHATQ5VTY9 493 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 P3H4Q92791 437 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 GTF3C6Q969F1 213 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 POLD1P28340 1107 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 ZNF131P52739 623 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 SLC39A6Q13433 755 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 C16orf71Q8IYS4 520 aaPredicted RBP14.53□□□□□ -0.08
HLCS-201ENST00000336648 HVCN1Q96D96 273 aa14.53□□□□□ -0.08
HLCS-201ENST00000336648 UAP1Q16222 522 aaPredicted RBP14.52□□□□□ -0.08
HLCS-201ENST00000336648 UTP14CQ5TAP6 766 aaKnown RBP14.52□□□□□ -0.08
HLCS-201ENST00000336648 NSFL1CQ9UNZ2 370 aaKnown RBP14.52□□□□□ -0.08
HLCS-201ENST00000336648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.52□□□□□ -0.08
HLCS-201ENST00000336648 NPATQ14207 1427 aa14.52□□□□□ -0.08
HLCS-201ENST00000336648 NONOQ15233 471 aaKnown RBP eCLIP14.52□□□□□ -0.086e-7■■□□□ 13
HLCS-201ENST00000336648 TTC38Q5R3I4 469 aa14.52□□□□□ -0.08
HLCS-201ENST00000336648 BANK1Q8NDB2 785 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 NSMCE1Q8WV22 266 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 DACT3Q96B18 629 aaPredicted RBP14.52□□□□□ -0.09
HLCS-201ENST00000336648 ZNF75DP51815 510 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 PLBD2Q8NHP8 589 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 IWS1Q96ST2 819 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 MYCBPQ99417 103 aaPredicted RBP14.52□□□□□ -0.09
HLCS-201ENST00000336648 RAB17Q9H0T7 212 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 POLKQ9UBT6 870 aa14.52□□□□□ -0.09
HLCS-201ENST00000336648 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.09
HLCS-201ENST00000336648 RASA3Q14644 834 aa14.51□□□□□ -0.09
HLCS-201ENST00000336648 GOLGA6BA6NDN3 693 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms