RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 EXOC6BQ9Y2D4 811 aa21.64■■□□□ 1.05
CMTM1-204ENST00000336328 PTCH2Q9Y6C5 1203 aa21.64■■□□□ 1.05
CMTM1-204ENST00000336328 TRIM75PA6NK02 468 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 IDH1O75874 414 aaKnown RBP21.63■■□□□ 1.05
CMTM1-204ENST00000336328 CYP7A1P22680 504 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 CAP1Q01518 475 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 RHPN1Q8TCX5 695 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 KIF1BPQ96EK5 621 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 AS3MTQ9HBK9 375 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 GINM1Q9NU53 330 aa21.63■■□□□ 1.05
CMTM1-204ENST00000336328 USP17L5A8MUK1 530 aa21.62■■□□□ 1.05
CMTM1-204ENST00000336328 PABPC4Q13310 644 aaKnown RBP eCLIP21.62■■□□□ 1.05
CMTM1-204ENST00000336328 TTF1Q15361 905 aaPredicted RBP21.62■■□□□ 1.05
CMTM1-204ENST00000336328 PROCA1Q8NCQ7 364 aaPredicted RBP21.62■■□□□ 1.05
CMTM1-204ENST00000336328 ZNF333Q96JL9 665 aa21.62■■□□□ 1.05
CMTM1-204ENST00000336328 PIH1D3Q9NQM4 214 aaKnown RBP21.62■■□□□ 1.05
CMTM1-204ENST00000336328 ZBTB40Q9NUA8 1239 aa21.62■■□□□ 1.05
CMTM1-204ENST00000336328 SRRDQ9UH36 339 aa21.62■■□□□ 1.05
CMTM1-204ENST00000336328 PNMA3Q9UL41 463 aa21.62■■□□□ 1.05
CMTM1-204ENST00000336328 COG6Q9Y2V7 657 aa21.62■■□□□ 1.05
CMTM1-204ENST00000336328 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
CMTM1-204ENST00000336328 HLA-DOAP06340 250 aa21.61■■□□□ 1.05
CMTM1-204ENST00000336328 FCGRTP55899 365 aa21.61■■□□□ 1.05
CMTM1-204ENST00000336328 MAPKAPK5Q8IW41 473 aa21.61■■□□□ 1.05
CMTM1-204ENST00000336328 CRACR2BQ8N4Y2 399 aaPredicted RBP21.61■■□□□ 1.05
CMTM1-204ENST00000336328 ZNF280CQ8ND82 737 aa21.61■■□□□ 1.05
CMTM1-204ENST00000336328 ARHGAP39Q9C0H5 1083 aa21.61■■□□□ 1.05
CMTM1-204ENST00000336328 TLR7Q9NYK1 1049 aaKnown RBP21.61■■□□□ 1.05
CMTM1-204ENST00000336328 DOCK1Q14185 1865 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 ADGRA2Q96PE1 1338 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 ASNSP08243 561 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 CYP2C8P10632 490 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 BCRP11274 1271 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 SPP2Q13103 211 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 SLC4A8Q2Y0W8 1093 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 RAET1EQ8TD07 263 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 SMCR8Q8TEV9 937 aaPredicted RBP21.6■■□□□ 1.05
CMTM1-204ENST00000336328 AGTPBP1Q9UPW5 1226 aa21.6■■□□□ 1.05
CMTM1-204ENST00000336328 POTEFA5A3E0 1075 aa21.59■■□□□ 1.05
CMTM1-204ENST00000336328 FAM196BA6NMK8 535 aa21.59■■□□□ 1.05
CMTM1-204ENST00000336328 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
CMTM1-204ENST00000336328 SLURP2P0DP57 97 aa21.59■■□□□ 1.05
CMTM1-204ENST00000336328 PRPF38BQ5VTL8 546 aaKnown RBP21.59■■□□□ 1.05
CMTM1-204ENST00000336328 METTL16Q86W50 562 aaKnown RBP21.59■■□□□ 1.05
CMTM1-204ENST00000336328 TRIM47Q96LD4 638 aa21.59■■□□□ 1.05
CMTM1-204ENST00000336328 IL1RAPL2Q9NP60 686 aa21.59■■□□□ 1.05
CMTM1-204ENST00000336328 FLT1P17948 1338 aa21.58■■□□□ 1.05
CMTM1-204ENST00000336328 PDE3AQ14432 1141 aa21.58■■□□□ 1.05
CMTM1-204ENST00000336328 ADGRA1Q86SQ6 560 aa21.58■■□□□ 1.05
CMTM1-204ENST00000336328 MAGEB6Q8N7X4 407 aa21.58■■□□□ 1.05
CMTM1-204ENST00000336328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.58■■□□□ 1.05
CMTM1-204ENST00000336328 OSBPP22059 807 aa21.57■■□□□ 1.04
CMTM1-204ENST00000336328 USP5P45974 858 aa21.57■■□□□ 1.04
CMTM1-204ENST00000336328 WDR18Q9BV38 432 aa21.57■■□□□ 1.04
CMTM1-204ENST00000336328 PALD1Q9ULE6 856 aa21.57■■□□□ 1.04
CMTM1-204ENST00000336328 MYPNQ86TC9 1320 aa21.56■■□□□ 1.04
CMTM1-204ENST00000336328 MAST2Q6P0Q8 1798 aa21.56■■□□□ 1.04
CMTM1-204ENST00000336328 C19orf81C9J6K1 198 aa21.56■■□□□ 1.04
CMTM1-204ENST00000336328 GCLCP48506 637 aaPredicted RBP21.56■■□□□ 1.04
CMTM1-204ENST00000336328 DYNLL1P63167 89 aaKnown RBP21.56■■□□□ 1.04
CMTM1-204ENST00000336328 SH3D19Q5HYK7 790 aa21.56■■□□□ 1.04
CMTM1-204ENST00000336328 TTC6Q86TZ1 520 aa21.56■■□□□ 1.04
CMTM1-204ENST00000336328 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
CMTM1-204ENST00000336328 PHIPQ8WWQ0 1821 aa21.55■■□□□ 1.04
CMTM1-204ENST00000336328 ECM2O94769 699 aaPredicted RBP21.55■■□□□ 1.04
CMTM1-204ENST00000336328 EN2P19622 333 aaPredicted RBP21.55■■□□□ 1.04
CMTM1-204ENST00000336328 GRK4P32298 578 aa21.55■■□□□ 1.04
CMTM1-204ENST00000336328 SH3TC2Q8TF17 1288 aa21.55■■□□□ 1.04
CMTM1-204ENST00000336328 TMOD4Q9NZQ9 345 aa21.55■■□□□ 1.04
CMTM1-204ENST00000336328 PTPRFP10586 1907 aa21.55■■□□□ 1.04
CMTM1-204ENST00000336328 APBB1O00213 710 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 CTGFP29279 349 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 HMGCS2P54868 508 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 BACE1P56817 501 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 UBXN2AP68543 259 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 CCDC84Q86UT8 332 aaPredicted RBP21.54■■□□□ 1.04
CMTM1-204ENST00000336328 MIGA1Q8NAN2 632 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 NKX2-3Q8TAU0 364 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 ANTXR1Q9H6X2 564 aa21.54■■□□□ 1.04
CMTM1-204ENST00000336328 BIN2Q9UBW5 565 aaPredicted RBP21.54■■□□□ 1.04
CMTM1-204ENST00000336328 RBBP6Q7Z6E9 1792 aaKnown RBP21.53■■□□□ 1.04
CMTM1-204ENST00000336328 TNRC18O15417 2968 aaPredicted RBP21.53■■□□□ 1.04
CMTM1-204ENST00000336328 RRP1BQ14684 758 aaKnown RBP21.53■■□□□ 1.04
CMTM1-204ENST00000336328 SIRT2Q8IXJ6 389 aa21.53■■□□□ 1.04
CMTM1-204ENST00000336328 COA7Q96BR5 231 aa21.53■■□□□ 1.04
CMTM1-204ENST00000336328 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.53■■□□□ 1.04
CMTM1-204ENST00000336328 SAP30BPQ9UHR5 308 aaKnown RBP21.53■■□□□ 1.04
CMTM1-204ENST00000336328 USP17L10C9JJH3 530 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 TNPO2O14787 897 aaKnown RBP21.52■■□□□ 1.04
CMTM1-204ENST00000336328 CAPN2P17655 700 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 FAM110CQ1W6H9 321 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 TREML2Q5T2D2 321 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 SLC9C2Q5TAH2 1124 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 SLAIN1Q8ND83 568 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 SERPINB13Q9UIV8 391 aa21.52■■□□□ 1.04
CMTM1-204ENST00000336328 FOCADQ5VW36 1801 aa21.51■■□□□ 1.03
CMTM1-204ENST00000336328 ATAD5Q96QE3 1844 aa21.51■■□□□ 1.03
CMTM1-204ENST00000336328 MAGEB6P1A0A0J9YX57 407 aa21.51■■□□□ 1.03
CMTM1-204ENST00000336328 ANKRD13CQ8N6S4 541 aa21.51■■□□□ 1.03
CMTM1-204ENST00000336328 CRNKL1Q9BZJ0 848 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms