RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 SNRPA1P09661 255 aaKnown RBP7.45□□□□□ -1.22
CPEB4-202ENST00000334035 ZNF853P0CG23 659 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 ATF3P18847 181 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 RPL13P26373 211 aaKnown RBP7.45□□□□□ -1.22
CPEB4-202ENST00000334035 PAXIP1Q6ZW49 1069 aaPredicted RBP7.45□□□□□ -1.22
CPEB4-202ENST00000334035 UBL4BQ8N7F7 174 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 ANAPC4Q9UJX5 808 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 MACROD2A1Z1Q3 448 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 ZNF444Q8N0Y2 327 aaPredicted RBP7.45□□□□□ -1.22
CPEB4-202ENST00000334035 RIPOR2Q9Y4F9 1068 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 NCOA3Q9Y6Q9 1424 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 TRPM2O94759 1503 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 MINDY4BA8MYZ0 360 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 RANBP6O60518 1105 aaKnown RBP7.45□□□□□ -1.22
CPEB4-202ENST00000334035 CTNNA2P26232 953 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 LIG3P49916 1009 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 TBC1D8BQ0IIM8 1120 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 ME3Q16798 604 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 CCDC144CPQ8IYA2 1237 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 PPP1R14CQ8TAE6 165 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 TUBB6Q9BUF5 446 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 MKNK2Q9HBH9 465 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 C6orf50Q9HD87 102 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 ODF2LQ9ULJ1 636 aa7.45□□□□□ -1.22
CPEB4-202ENST00000334035 LDHCP07864 332 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 KRT9P35527 623 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 PDE6BP35913 854 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 ATP2B2Q01814 1243 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 TRPC3Q13507 836 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 GLE1Q53GS7 698 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 HSP90AA4PQ58FG1 418 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 MYSM1Q5VVJ2 828 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 SPATA1Q5VX52 437 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 CACTINQ8WUQ7 758 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 POLR3EQ9NVU0 708 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 HPDP32754 393 aaPredicted RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 IRX5P78411 483 aaPredicted RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 GSTO1P78417 241 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 IFIT1BQ5T764 474 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 TTC6Q86TZ1 520 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 SSH3Q8TE77 659 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 NCAPGQ9BPX3 1015 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 MAGI2Q86UL8 1455 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 NR1I2O75469 434 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 BRD2P25440 801 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 USP5P45974 858 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 RAD51AP2Q09MP3 1159 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 DTHD1Q6ZMT9 781 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 VSTM4Q8IW00 320 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 APLFQ8IW19 511 aaPredicted RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 TRIM4Q9C037 500 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 POGZQ7Z3K3 1410 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 NUTM2BA6NNL0 878 aaPredicted RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 NUTM2EB1AL46 878 aaPredicted RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 SEMA3EO15041 775 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 EIF4A2Q14240 407 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 HSP90AA5PQ58FG0 334 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 CCDC62Q6P9F0 684 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 CRNKL1Q9BZJ0 848 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 UBA5Q9GZZ9 404 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 KLHL14Q9P2G3 628 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 PFKFB1P16118 471 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 IL13P35225 146 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 DNM2P50570 870 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 ASIC2Q16515 512 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 EMBQ6PCB8 327 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 LSG1Q9H089 658 aaKnown RBP7.44□□□□□ -1.22
CPEB4-202ENST00000334035 VIPAS39Q9H9C1 493 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 CHPF2Q9P2E5 772 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 ZNF652Q9Y2D9 606 aa7.44□□□□□ -1.22
CPEB4-202ENST00000334035 CC2D1AQ6P1N0 951 aaPredicted RBP7.43□□□□□ -1.22
CPEB4-202ENST00000334035 ANKRD13DQ6ZTN6 518 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 CCDC197Q8NCU1 140 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 OTUD7AQ8TE49 926 aaPredicted RBP7.43□□□□□ -1.22
CPEB4-202ENST00000334035 PARD6BQ9BYG5 372 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 Q9H521 79 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 BAIAP2L1Q9UHR4 511 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 LAMC1P11047 1609 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 CCDC169A6NNP5 214 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 HMGB1P1B2RPK0 211 aaPredicted RBP7.43□□□□□ -1.22
CPEB4-202ENST00000334035 H7C1D1 291 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 IRX1P78414 480 aaPredicted RBP7.43□□□□□ -1.22
CPEB4-202ENST00000334035 PPP1R7Q15435 360 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 KRT79Q5XKE5 535 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 PNMA8AQ86V59 439 aaPredicted RBP7.43□□□□□ -1.22
CPEB4-202ENST00000334035 VSIG1Q86XK7 387 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 DTNBP1Q96EV8 351 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 KCNK9Q9NPC2 374 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 RCOR1Q9UKL0 485 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 GNA11P29992 359 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 MAGEA1P43355 309 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 CCT5P48643 541 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 HAND2P61296 217 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 DYNC1I2Q13409 638 aaKnown RBP7.43□□□□□ -1.22
CPEB4-202ENST00000334035 RPS6KA1Q15418 735 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 TCERG1LQ5VWI1 586 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 DENND2CQ68D51 928 aa7.43□□□□□ -1.22
CPEB4-202ENST00000334035 ANKLE2Q86XL3 938 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms