RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
APOBEC3B-201ENST00000333467 SLF2Q8IX21 1173 aa13.28□□□□□ -0.28
APOBEC3B-201ENST00000333467 ZNF296Q8WUU4 475 aaPredicted RBP13.28□□□□□ -0.28
APOBEC3B-201ENST00000333467 CFHR5Q9BXR6 569 aa13.28□□□□□ -0.28
APOBEC3B-201ENST00000333467 DBNLQ9UJU6 430 aaKnown RBP13.28□□□□□ -0.28
APOBEC3B-201ENST00000333467 CENPFP49454 3210 aa13.27□□□□□ -0.28
APOBEC3B-201ENST00000333467 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 ALDH1A1P00352 501 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 MRE11P49959 708 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 NUCB2P80303 420 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 MIGA2Q7L4E1 593 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZKSCAN4Q969J2 545 aaPredicted RBP13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 NSUN4Q96CB9 384 aaKnown RBP13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZNF341Q9BYN7 854 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 RAI14Q9P0K7 980 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 BRPF3Q9ULD4 1205 aa13.27□□□□□ -0.29
APOBEC3B-201ENST00000333467 COL2A1P02458 1487 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 LOC285556D6RIA3 1793 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 GPR25O00155 361 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 INPP5BP32019 993 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 INHBEP58166 350 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 PICALMQ13492 652 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZFPM1Q8IX07 1006 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
APOBEC3B-201ENST00000333467 GPR75-ASB3A0A0A6YYF3 556 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 ST18O60284 1047 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 ENTPD3O75355 529 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 GSTO1P78417 241 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 EAF2Q96CJ1 260 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 PTPN18Q99952 460 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 USP26Q9BXU7 913 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 MGAMO43451 1857 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 MYH8P13535 1937 aa13.25□□□□□ -0.29
APOBEC3B-201ENST00000333467 CCL15-CCL14A0A0B4J2E2 113 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 CCDC85CA6NKD9 419 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 MCM2P49736 904 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 RHBDL3P58872 404 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 CCL15Q16663 113 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 ERO1BQ86YB8 467 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 BRI3BPQ8WY22 251 aa13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 TNPO1Q92973 898 aaKnown RBP13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 RBBP6Q7Z6E9 1792 aaKnown RBP13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 TNRC18O15417 2968 aaPredicted RBP13.24□□□□□ -0.29
APOBEC3B-201ENST00000333467 ERC2O15083 957 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZAP70P43403 619 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 GTF2A2P52657 109 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 CRHR2Q13324 411 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 SH3BP5LQ7L8J4 393 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 AACSQ86V21 672 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZNF512BQ96KM6 892 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 DCBLD2Q96PD2 775 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 DDTLA6NHG4 134 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 IRF6O14896 467 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 FKTNO75072 461 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 LDHCP07864 332 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 PPIL2Q13356 520 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 OTUD7BQ6GQQ9 843 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 NAA16Q6N069 864 aaPredicted RBP13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 SPRYD3Q8NCJ5 442 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 ZNF112Q9UJU3 913 aa13.23□□□□□ -0.29
APOBEC3B-201ENST00000333467 APBB1O00213 710 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 SDSP20132 328 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 ANAPC15P60006 121 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 NOL9Q5SY16 702 aaKnown RBP13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 NOL10Q9BSC4 688 aaKnown RBP13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 AATFQ9NY61 560 aaKnown RBP eCLIP13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 NDUFB9Q9Y6M9 179 aa13.22□□□□□ -0.29
APOBEC3B-201ENST00000333467 MCCP23508 829 aa13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 PDE1AP54750 535 aa13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 PPATQ06203 517 aa13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 TEX11Q8IYF3 940 aa13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 SH3RF3Q8TEJ3 882 aaPredicted RBP13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
APOBEC3B-201ENST00000333467 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms