RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-201ENST00000333371 CDKL5O76039 1030 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 NR5A1Q13285 461 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 USP49Q70CQ1 688 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 ZNF771Q7L3S4 317 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-201ENST00000333371 IFNL3Q8IZI9 196 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 SLC12A7Q9Y666 1083 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 FMR1Q06787 632 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS33B-201ENST00000333371 CCDC93Q567U6 631 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 CPLX2Q6PUV4 134 aaKnown RBP14.17□□□□□ -0.14
VPS33B-201ENST00000333371 NAPBQ9H115 298 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 EPC1Q9H2F5 836 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 SEC31BQ9NQW1 1179 aa14.17□□□□□ -0.14
VPS33B-201ENST00000333371 ABCC12Q96J65 1359 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 TRIM65Q6PJ69 517 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 JMYQ8N9B5 988 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 CCDC87Q9NVE4 849 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS33B-201ENST00000333371 ATRNO75882 1429 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 MYH6P13533 1939 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 SPATA31A5Q5VU36 1347 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 SPATA31A7Q8IWB4 1347 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 PDE8AO60658 829 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 TOM1O60784 492 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
VPS33B-201ENST00000333371 RASGRF1Q13972 1273 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 TTF1Q15361 905 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-201ENST00000333371 OLFM4Q6UX06 510 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 DIS3L2Q8IYB7 885 aaKnown RBP14.16□□□□□ -0.14
VPS33B-201ENST00000333371 MARCH10Q8NA82 808 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-201ENST00000333371 OXER1Q8TDS5 423 aa14.16□□□□□ -0.14
VPS33B-201ENST00000333371 IQSEC3Q9UPP2 1182 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-201ENST00000333371 KIF2AO00139 706 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 POLR2DO15514 142 aaKnown RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 SLFN14P0C7P3 912 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 ADKP55263 362 aaKnown RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 ETF1P62495 437 aaKnown RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 NOSTRINQ8IVI9 506 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 REXO1L1PQ8IX06 675 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 TMEM87BQ96K49 555 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 SERTAD1Q9UHV2 236 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 PCDHB6Q9Y5E3 794 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 LOC102724428A0A0B4J2F2 783 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 CUTAO60888 179 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 ARID4AP29374 1257 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 CRKLP46109 303 aaKnown RBP14.15□□□□□ -0.14
VPS33B-201ENST00000333371 SIK1P57059 783 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 SGMS1Q86VZ5 419 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 KRT222Q8N1A0 295 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 SPATA5Q8NB90 893 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 MAN1B1Q9UKM7 699 aa14.15□□□□□ -0.14
VPS33B-201ENST00000333371 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 URI1O94763 535 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-201ENST00000333371 CLCN6P51797 869 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 MDM2Q00987 491 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-201ENST00000333371 TMEM139Q8IV31 216 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 KRI1Q8N9T8 703 aaKnown RBP14.14□□□□□ -0.15
VPS33B-201ENST00000333371 NUP133Q8WUM0 1156 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 MED15Q96RN5 788 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.14□□□□□ -0.15
VPS33B-201ENST00000333371 FAM237AA0A1B0GTK4 181 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
VPS33B-201ENST00000333371 CASP1P29466 404 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 MYH2Q9UKX2 1941 aa14.14□□□□□ -0.15
VPS33B-201ENST00000333371 NRDCO43847 1150 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 FMNL1O95466 1100 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-201ENST00000333371 MMP1P03956 469 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
VPS33B-201ENST00000333371 INTS5Q6P9B9 1019 aaKnown RBP14.13□□□□□ -0.15
VPS33B-201ENST00000333371 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-201ENST00000333371 H2AFXP16104 143 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-201ENST00000333371 BCAMP50895 628 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 AKNAD1Q5T1N1 836 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 MFSD6Q6ZSS7 791 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 ZNF34Q8IZ26 560 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 SHISA4Q96DD7 197 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 CARD6Q9BX69 1037 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
VPS33B-201ENST00000333371 NFE2L3Q9Y4A8 694 aa14.13□□□□□ -0.15
VPS33B-201ENST00000333371 SLIT2O94813 1529 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 VWA3AA6NCI4 1184 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 TDO2P48775 406 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 POSTNQ15063 836 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 PUM3Q15397 648 aaKnown RBP14.12□□□□□ -0.15
VPS33B-201ENST00000333371 TOGARAM2Q6ZUX3 1019 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 ZNF512BQ96KM6 892 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-201ENST00000333371 DESI2Q9BSY9 194 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 SLC4A4Q9Y6R1 1079 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 WTIPA6NIX2 430 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-201ENST00000333371 CBFA2T2O43439 604 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 FGFR2P21802 821 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 RTN1Q16799 776 aa14.12□□□□□ -0.15
VPS33B-201ENST00000333371 BARGINQ6ZT62 677 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms