RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 AFMP43652 599 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 PLCD1P51178 756 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 NDUFA8P51970 172 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
COPB2-201ENST00000333188 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 HEATR3Q7Z4Q2 680 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 PROM2Q8N271 834 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 IGDCC4Q8TDY8 1250 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 UBA5Q9GZZ9 404 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 CD209Q9NNX6 404 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 CNTNAP4Q9C0A0 1308 aa10.44□□□□□ -0.74
COPB2-201ENST00000333188 PES1O00541 588 aaKnown RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 TRMT1LQ7Z2T5 733 aaKnown RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 ZNF384Q8TF68 577 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 ZSCAN10Q96SZ4 725 aaPredicted RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 GOLPH3LQ9H4A5 285 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 VEGFAP15692 232 aaPredicted RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 EZH2Q15910 746 aaKnown RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 PCDHAC2Q9Y5I4 1007 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 XDHP47989 1333 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 SMC2O95347 1197 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 LRRC47Q8N1G4 583 aaKnown RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 FAM43AQ8N2R8 423 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 R3HCC1Q9Y3T6 440 aaKnown RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 FRMPD2Q68DX3 1309 aaPredicted RBP10.43□□□□□ -0.74
COPB2-201ENST00000333188 ARFGEF2Q9Y6D5 1785 aa10.43□□□□□ -0.74
COPB2-201ENST00000333188 PARP4Q9UKK3 1724 aaKnown RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 PPEF1O14829 653 aaPredicted RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 MCM7P33993 719 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 KIAA2012Q0VF49 1180 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 NOM1Q5C9Z4 860 aaKnown RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 ANO1Q5XXA6 986 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 C2CD5Q86YS7 1000 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 GRAMD1CQ8IYS0 662 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 CRACR2BQ8N4Y2 399 aaPredicted RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 ZNF592Q92610 1267 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 LLPHQ9BRT6 129 aaKnown RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 C21orf2O43822 256 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 SPTY2D1Q68D10 685 aaPredicted RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 CLEC17AQ6ZS10 378 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 PIK3AP1Q6ZUJ8 805 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 GPCPD1Q9NPB8 672 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 MARCH6O60337 910 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 CASP1P29466 404 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 RC3H1Q5TC82 1133 aaKnown RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 FBXO33Q7Z6M2 555 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 WDR66Q8TBY9 1149 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 MRPS27Q92552 414 aaKnown RBP10.42□□□□□ -0.74
COPB2-201ENST00000333188 EEF2KMTQ96G04 330 aa10.42□□□□□ -0.74
COPB2-201ENST00000333188 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 TAF1P21675 1872 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 ZBTB7AO95365 584 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 XBP1P17861 261 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 TM4SF1P30408 202 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 KIF23Q02241 960 aaPredicted RBP10.41□□□□□ -0.74
COPB2-201ENST00000333188 ZYXQ15942 572 aaKnown RBP10.41□□□□□ -0.74
COPB2-201ENST00000333188 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 RIOK1Q9BRS2 568 aaKnown RBP10.41□□□□□ -0.74
COPB2-201ENST00000333188 MYH14Q7Z406 1995 aaKnown RBP10.41□□□□□ -0.74
COPB2-201ENST00000333188 SLIT2O94813 1529 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 CCDC196A0A1B0GTZ2 297 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 SYKP43405 635 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 AOPEPQ8N6M6 819 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 TBC1D16Q8TBP0 767 aa10.41□□□□□ -0.74
COPB2-201ENST00000333188 RAD17O75943 681 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.74
COPB2-201ENST00000333188 GRIN1Q05586 938 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 CNNM3Q8NE01 707 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 ANO8Q9HCE9 1232 aaPredicted RBP10.4□□□□□ -0.74
COPB2-201ENST00000333188 USP40Q9NVE5 1235 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 PCNTO95613 3336 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 LRP6O75581 1613 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 VWA3AA6NCI4 1184 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 DHX58Q96C10 678 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 VEZTQ9HBM0 779 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 CBX8Q9HC52 389 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 MAPK8IP1Q9UQF2 711 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 PCDHB6Q9Y5E3 794 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 USP54Q70EL1 1684 aa10.4□□□□□ -0.74
COPB2-201ENST00000333188 CLRN2A0PK11 232 aa10.4□□□□□ -0.75
COPB2-201ENST00000333188 SNAP25P60880 206 aa10.4□□□□□ -0.75
COPB2-201ENST00000333188 RBM6P78332 1123 aaKnown RBP10.4□□□□□ -0.75
COPB2-201ENST00000333188 PNOCQ13519 176 aa10.4□□□□□ -0.75
COPB2-201ENST00000333188 ILDR1Q86SU0 546 aaPredicted RBP10.4□□□□□ -0.75
COPB2-201ENST00000333188 PNMA1Q8ND90 353 aa10.4□□□□□ -0.75
COPB2-201ENST00000333188 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 H0YIN7 160 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 ZNF202O95125 648 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 LDHCP07864 332 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 STX17P56962 302 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 C11orf57Q6ZUT1 292 aaPredicted RBP10.39□□□□□ -0.75
COPB2-201ENST00000333188 NBPF11Q86T75 865 aa10.39□□□□□ -0.75
COPB2-201ENST00000333188 DDX19AQ9NUU7 478 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms