RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 TDO2P48775 406 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 GABPAQ06546 454 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 SLC4A8Q2Y0W8 1093 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 DCAF15Q66K64 600 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 NACAP1Q9BZK3 213 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 NAPBQ9H115 298 aa19.18■□□□□ 0.66
LRRC28-202ENST00000331450 HERC5Q9UII4 1024 aaKnown RBP19.18■□□□□ 0.66
LRRC28-202ENST00000331450 CYP2D7A0A087X1C5 515 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 SMIM22K7EJ46 135 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 PPP1R12BO60237 982 aaPredicted RBP19.17■□□□□ 0.66
LRRC28-202ENST00000331450 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
LRRC28-202ENST00000331450 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 MOB2Q70IA6 237 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 MIGA2Q7L4E1 593 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 FOXP4Q8IVH2 680 aaPredicted RBP19.17■□□□□ 0.66
LRRC28-202ENST00000331450 KLRG1Q96E93 195 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 SERPINB13Q9UIV8 391 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 ZNF112Q9UJU3 913 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
LRRC28-202ENST00000331450 FAM196BA6NMK8 535 aa19.16■□□□□ 0.66
LRRC28-202ENST00000331450 FGAP02671 866 aa19.16■□□□□ 0.66
LRRC28-202ENST00000331450 C2orf69Q8N8R5 385 aa19.16■□□□□ 0.66
LRRC28-202ENST00000331450 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.66
LRRC28-202ENST00000331450 ZNF341Q9BYN7 854 aa19.16■□□□□ 0.66
LRRC28-202ENST00000331450 CREBZFQ9NS37 354 aa19.16■□□□□ 0.66
LRRC28-202ENST00000331450 TLL2Q9Y6L7 1015 aa19.16■□□□□ 0.66
LRRC28-202ENST00000331450 PHF20L1A8MW92 1017 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 PTH1RQ03431 593 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 PRKG1Q13976 671 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 LDLRAD1Q5T700 205 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 ARMC9Q7Z3E5 817 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 SAPCD2Q86UD0 394 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 AMOTL1Q8IY63 956 aa19.15■□□□□ 0.66
LRRC28-202ENST00000331450 ANGEL1Q9UNK9 670 aaKnown RBP19.15■□□□□ 0.66
LRRC28-202ENST00000331450 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.66
LRRC28-202ENST00000331450 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.65
LRRC28-202ENST00000331450 CRACR2BQ8N4Y2 399 aaPredicted RBP19.14■□□□□ 0.65
LRRC28-202ENST00000331450 LSG1Q9H089 658 aaKnown RBP19.14■□□□□ 0.65
LRRC28-202ENST00000331450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.14■□□□□ 0.65
LRRC28-202ENST00000331450 ANAPC4Q9UJX5 808 aa19.14■□□□□ 0.65
LRRC28-202ENST00000331450 PTPRFP10586 1907 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 UNCXA6NJT0 531 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 HSPA6P17066 643 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 SHMT1P34896 483 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 IREB2P48200 963 aaKnown RBP19.13■□□□□ 0.65
LRRC28-202ENST00000331450 PPARAQ07869 468 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 TTLL12Q14166 644 aaPredicted RBP19.13■□□□□ 0.65
LRRC28-202ENST00000331450 TATDN1Q6P1N9 297 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.13■□□□□ 0.65
LRRC28-202ENST00000331450 MAP4K1Q92918 833 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 DYNLL2Q96FJ2 89 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 WRNIP1Q96S55 665 aa19.13■□□□□ 0.65
LRRC28-202ENST00000331450 MINDY4BA8MYZ0 360 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 UBE2Q2LH0YL09 131 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 INPP5BP32019 993 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 RRP1BQ14684 758 aaKnown RBP19.12■□□□□ 0.65
LRRC28-202ENST00000331450 NOL9Q5SY16 702 aaKnown RBP19.12■□□□□ 0.65
LRRC28-202ENST00000331450 ANKRD13AQ8IZ07 590 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 SLC44A5Q8NCS7 719 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 HHIPL1Q96JK4 782 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 NBPF3Q9H094 633 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 SWAP70Q9UH65 585 aa19.12■□□□□ 0.65
LRRC28-202ENST00000331450 HUNKP57058 714 aa19.11■□□□□ 0.65
LRRC28-202ENST00000331450 MAP3K9P80192 1104 aa19.11■□□□□ 0.65
LRRC28-202ENST00000331450 SNCAIPQ9Y6H5 919 aa19.11■□□□□ 0.65
LRRC28-202ENST00000331450 RASSF10A6NK89 507 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 CDK8P49336 464 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 VGLL4Q14135 290 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 KIAA1211Q6ZU35 1233 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 CLMNQ96JQ2 1002 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 TRIM34Q9BYJ4 488 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 CTNNA3Q9UI47 895 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 ABT1Q9ULW3 272 aaKnown RBP19.1■□□□□ 0.65
LRRC28-202ENST00000331450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.1■□□□□ 0.65
LRRC28-202ENST00000331450 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
LRRC28-202ENST00000331450 U3KPZ7 1027 aaPredicted RBP19.1■□□□□ 0.65
LRRC28-202ENST00000331450 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
LRRC28-202ENST00000331450 FGRP09769 529 aa19.09■□□□□ 0.65
LRRC28-202ENST00000331450 CAP2P40123 477 aa19.09■□□□□ 0.65
LRRC28-202ENST00000331450 CTDSPL2Q05D32 466 aa19.09■□□□□ 0.65
LRRC28-202ENST00000331450 ZKSCAN4Q969J2 545 aaPredicted RBP19.09■□□□□ 0.65
LRRC28-202ENST00000331450 RBM8AQ9Y5S9 174 aaKnown RBP19.09■□□□□ 0.65
LRRC28-202ENST00000331450 HAND2P61296 217 aa19.08■□□□□ 0.64
LRRC28-202ENST00000331450 JAG1P78504 1218 aa19.08■□□□□ 0.64
LRRC28-202ENST00000331450 C8orf34Q49A92 452 aa19.08■□□□□ 0.64
LRRC28-202ENST00000331450 TBC1D10CQ8IV04 446 aa19.08■□□□□ 0.64
LRRC28-202ENST00000331450 SCYL3Q8IZE3 742 aa19.08■□□□□ 0.64
LRRC28-202ENST00000331450 CSADQ9Y600 493 aa19.08■□□□□ 0.64
LRRC28-202ENST00000331450 LOC285556D6RIA3 1793 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 ZNF213O14771 459 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 REC8O95072 547 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 CYP21A2P08686 494 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 RASA1P20936 1047 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 HTRA3P83110 453 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 NECTIN1Q15223 517 aa19.07■□□□□ 0.64
LRRC28-202ENST00000331450 IMMTQ16891 758 aaKnown RBP19.07■□□□□ 0.64
LRRC28-202ENST00000331450 SHROOM1Q2M3G4 852 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms