RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 N4BP1O75113 896 aaKnown RBP20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 GTF2A1P52655 376 aaPredicted RBP20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 PDE4BQ07343 736 aa20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 METTL16Q86W50 562 aaKnown RBP20.69■□□□□ 0.9
CLSTN3-202ENST00000331148 H7C1W4 665 aa20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 GOLIM4O00461 696 aa20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 ERLIN1O75477 346 aa20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 HSP90AA4PQ58FG1 418 aa20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 TAF7LQ5H9L4 462 aa20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 IRX2Q9BZI1 471 aaPredicted RBP20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 PUF60Q9UHX1 559 aaKnown RBP20.68■□□□□ 0.9
CLSTN3-202ENST00000331148 FAM237AA0A1B0GTK4 181 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 KCNQ2O43526 872 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 CDC27P30260 824 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 CASP7P55210 303 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 TCIRG1Q13488 830 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 TTC31Q49AM3 519 aaPredicted RBP20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 CEP112Q8N8E3 955 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 L1RE1Q9UN81 338 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 HPS5Q9UPZ3 1129 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 MAST3O60307 1309 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 TJP1Q07157 1748 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 TTLL5Q6EMB2 1281 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 PACS2Q86VP3 889 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 PAG1Q9NWQ8 432 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 ZBTB1Q9Y2K1 713 aa20.67■□□□□ 0.9
CLSTN3-202ENST00000331148 LOC102724428A0A0B4J2F2 783 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 KLF18A0A0U1RQI7 1052 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 CCDC175P0C221 793 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 BMP6P22004 513 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 SIK1P57059 783 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 MTF1Q14872 753 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 GJD4Q96KN9 370 aaPredicted RBP20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 ABCB6Q9NP58 842 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 CDC23Q9UJX2 597 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 AFF2P51816 1311 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 PPP6R2O75170 966 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 RESP18Q5W5W9 173 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 FOXP4Q8IVH2 680 aaPredicted RBP20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 JMYQ8N9B5 988 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 ISCA1Q9BUE6 129 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 SUGCTQ9HAC7 445 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 PCDHA5Q9Y5H7 936 aa20.66■□□□□ 0.9
CLSTN3-202ENST00000331148 MAP3K15Q6ZN16 1313 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 CICQ96RK0 1608 aaPredicted RBP20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 EIF3CLB5ME19 914 aaKnown RBP20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 ZNF18P17022 549 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 EIF3CQ99613 913 aaKnown RBP20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 MKRN1Q9UHC7 482 aaKnown RBP20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 AKAP2Q9Y2D5 859 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 CPLX1O14810 134 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 PTPAQ15257 358 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 RABL6Q3YEC7 729 aaPredicted RBP20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 RAB11FIP4Q86YS3 637 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 LZTFL1Q9NQ48 299 aa20.65■□□□□ 0.9
CLSTN3-202ENST00000331148 SOWAHDA6NJG2 315 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 LONRF3Q496Y0 759 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 RAI14Q9P0K7 980 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 CCDC102BQ68D86 513 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 WWC2Q6AWC2 1192 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 GIGYF2Q6Y7W6 1299 aaKnown RBP20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 CNNM3Q8NE01 707 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 FAM71BQ8TC56 605 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 NFE2L3Q9Y4A8 694 aa20.64■□□□□ 0.89
CLSTN3-202ENST00000331148 PRC1O43663 620 aa20.63■□□□□ 0.89
CLSTN3-202ENST00000331148 FMR1Q06787 632 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLSTN3-202ENST00000331148 CLIC6Q96NY7 704 aa20.63■□□□□ 0.89
CLSTN3-202ENST00000331148 BRMS1Q9HCU9 246 aa20.63■□□□□ 0.89
CLSTN3-202ENST00000331148 JRKLQ9Y4A0 524 aa20.63■□□□□ 0.89
CLSTN3-202ENST00000331148 THSD7AQ9UPZ6 1657 aa20.63■□□□□ 0.89
CLSTN3-202ENST00000331148 KIF5CO60282 957 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 CORO7P57737 925 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 CASP8Q14790 479 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 LRRC31Q6UY01 552 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 GEMIN8Q9NWZ8 242 aaKnown RBP20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 ADGRG1Q9Y653 693 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 M0R2C6 588 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 VSNL1P62760 191 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 TUBB4BP68371 445 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 TUBB2AQ13885 445 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 HSP90B2PQ58FF3 399 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 VPS37DQ86XT2 251 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 PANX2Q96RD6 677 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 TUBB2BQ9BVA1 445 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 TRPC5Q9UL62 973 aaPredicted RBP20.62■□□□□ 0.89
CLSTN3-202ENST00000331148 A0A0U1RQJ8 604 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 FOXN1O15353 648 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 HSP90AB3PQ58FF7 597 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 RAD9BQ6WBX8 426 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 TICAM2Q86XR7 235 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 ATRIPQ8WXE1 791 aa20.61■□□□□ 0.89
CLSTN3-202ENST00000331148 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms