RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 CPA4Q9UI42 421 aa22.14■■□□□ 1.13
RAB28-202ENST00000330852 DDX19BQ9UMR2 479 aa22.14■■□□□ 1.13
RAB28-202ENST00000330852 MGAMO43451 1857 aa22.13■■□□□ 1.13
RAB28-202ENST00000330852 TMEM106CQ9BVX2 250 aa22.13■■□□□ 1.13
RAB28-202ENST00000330852 ZSWIM8A7E2V4 1837 aa22.12■■□□□ 1.13
RAB28-202ENST00000330852 HMMRO75330 724 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 BCRP11274 1271 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 PSMC4P43686 418 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 FOXP4Q8IVH2 680 aaPredicted RBP22.11■■□□□ 1.13
RAB28-202ENST00000330852 ARHGAP39Q9C0H5 1083 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 EXOC6BQ9Y2D4 811 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 CAP2P40123 477 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 GADL1Q6ZQY3 521 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
RAB28-202ENST00000330852 SRRDQ9UH36 339 aa22.11■■□□□ 1.13
RAB28-202ENST00000330852 POTEFA5A3E0 1075 aa22.1■■□□□ 1.13
RAB28-202ENST00000330852 PRPF38BQ5VTL8 546 aaKnown RBP22.1■■□□□ 1.13
RAB28-202ENST00000330852 PIH1D3Q9NQM4 214 aaKnown RBP22.1■■□□□ 1.13
RAB28-202ENST00000330852 GINM1Q9NU53 330 aa22.1■■□□□ 1.13
RAB28-202ENST00000330852 TRIM75PA6NK02 468 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 SLURP2P0DP57 97 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 AACSQ86V21 672 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 METTL16Q86W50 562 aaKnown RBP22.09■■□□□ 1.13
RAB28-202ENST00000330852 PROCA1Q8NCQ7 364 aaPredicted RBP22.09■■□□□ 1.13
RAB28-202ENST00000330852 TGFBRAP1Q8WUH2 860 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 TRIM47Q96LD4 638 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 ZBTB40Q9NUA8 1239 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 AGTPBP1Q9UPW5 1226 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 SIPA1L1O43166 1804 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 FMNL1O95466 1100 aaPredicted RBP22.09■■□□□ 1.13
RAB28-202ENST00000330852 CYP2C8P10632 490 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 MAP3K12Q12852 859 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 ADGRA1Q86SQ6 560 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 ZNF280CQ8ND82 737 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 RHPN1Q8TCX5 695 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 AS3MTQ9HBK9 375 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 RCAN3Q9UKA8 241 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 PNMA3Q9UL41 463 aa22.09■■□□□ 1.13
RAB28-202ENST00000330852 FLT1P17948 1338 aa22.08■■□□□ 1.13
RAB28-202ENST00000330852 MYH1P12882 1939 aa22.08■■□□□ 1.13
RAB28-202ENST00000330852 FAM196BA6NMK8 535 aa22.08■■□□□ 1.12
RAB28-202ENST00000330852 USP17L5A8MUK1 530 aa22.08■■□□□ 1.12
RAB28-202ENST00000330852 IDH1O75874 414 aaKnown RBP22.08■■□□□ 1.12
RAB28-202ENST00000330852 CYP7A1P22680 504 aa22.08■■□□□ 1.12
RAB28-202ENST00000330852 KIF1BPQ96EK5 621 aa22.08■■□□□ 1.12
RAB28-202ENST00000330852 LOC285556D6RIA3 1793 aa22.08■■□□□ 1.12
RAB28-202ENST00000330852 CENPFP49454 3210 aa22.07■■□□□ 1.12
RAB28-202ENST00000330852 ASNSP08243 561 aa22.07■■□□□ 1.12
RAB28-202ENST00000330852 FCGRTP55899 365 aa22.07■■□□□ 1.12
RAB28-202ENST00000330852 MAPKAPK5Q8IW41 473 aa22.07■■□□□ 1.12
RAB28-202ENST00000330852 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
RAB28-202ENST00000330852 OSBPP22059 807 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 SPP2Q13103 211 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 PABPC4Q13310 644 aaKnown RBP eCLIP22.06■■□□□ 1.123e-11■□□□□ 9.8
RAB28-202ENST00000330852 TTF1Q15361 905 aaPredicted RBP22.06■■□□□ 1.12
RAB28-202ENST00000330852 SMCR8Q8TEV9 937 aaPredicted RBP22.06■■□□□ 1.12
RAB28-202ENST00000330852 COG6Q9Y2V7 657 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 RAB11FIP3O75154 756 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 HLA-DOAP06340 250 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 CTGFP29279 349 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 CRACR2BQ8N4Y2 399 aaPredicted RBP22.06■■□□□ 1.12
RAB28-202ENST00000330852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.06■■□□□ 1.12
RAB28-202ENST00000330852 WDR18Q9BV38 432 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 TRIM34Q9BYJ4 488 aa22.06■■□□□ 1.12
RAB28-202ENST00000330852 SLC4A8Q2Y0W8 1093 aa22.05■■□□□ 1.12
RAB28-202ENST00000330852 SH3D19Q5HYK7 790 aa22.05■■□□□ 1.12
RAB28-202ENST00000330852 RAET1EQ8TD07 263 aa22.05■■□□□ 1.12
RAB28-202ENST00000330852 MYPNQ86TC9 1320 aa22.04■■□□□ 1.12
RAB28-202ENST00000330852 MAGEB6Q8N7X4 407 aa22.04■■□□□ 1.12
RAB28-202ENST00000330852 IL1RAPL2Q9NP60 686 aa22.04■■□□□ 1.12
RAB28-202ENST00000330852 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.04■■□□□ 1.12
RAB28-202ENST00000330852 EN2P19622 333 aaPredicted RBP22.03■■□□□ 1.12
RAB28-202ENST00000330852 GCLCP48506 637 aaPredicted RBP22.03■■□□□ 1.12
RAB28-202ENST00000330852 PDE3AQ14432 1141 aa22.03■■□□□ 1.12
RAB28-202ENST00000330852 RRP1BQ14684 758 aaKnown RBP22.03■■□□□ 1.12
RAB28-202ENST00000330852 CCDC84Q86UT8 332 aaPredicted RBP22.03■■□□□ 1.12
RAB28-202ENST00000330852 SH3TC2Q8TF17 1288 aa22.03■■□□□ 1.12
RAB28-202ENST00000330852 PALD1Q9ULE6 856 aa22.03■■□□□ 1.12
RAB28-202ENST00000330852 GRK4P32298 578 aa22.03■■□□□ 1.12
RAB28-202ENST00000330852 DYNLL1P63167 89 aaKnown RBP22.03■■□□□ 1.12
RAB28-202ENST00000330852 DOCK3Q8IZD9 2030 aa22.02■■□□□ 1.12
RAB28-202ENST00000330852 IFIT2P09913 472 aaKnown RBP22.02■■□□□ 1.12
RAB28-202ENST00000330852 SIRT2Q8IXJ6 389 aa22.02■■□□□ 1.12
RAB28-202ENST00000330852 ANTXR1Q9H6X2 564 aa22.02■■□□□ 1.12
RAB28-202ENST00000330852 C19orf81C9J6K1 198 aa22.01■■□□□ 1.11
RAB28-202ENST00000330852 USP5P45974 858 aa22.01■■□□□ 1.11
RAB28-202ENST00000330852 FAM110CQ1W6H9 321 aa22.01■■□□□ 1.11
RAB28-202ENST00000330852 TREML2Q5T2D2 321 aa22.01■■□□□ 1.11
RAB28-202ENST00000330852 DNAJC18Q9H819 358 aa22.01■■□□□ 1.11
RAB28-202ENST00000330852 HMGCS2P54868 508 aa22■■□□□ 1.11
RAB28-202ENST00000330852 BACE1P56817 501 aa22■■□□□ 1.11
RAB28-202ENST00000330852 MIGA1Q8NAN2 632 aa22■■□□□ 1.11
RAB28-202ENST00000330852 SLAIN1Q8ND83 568 aa22■■□□□ 1.11
RAB28-202ENST00000330852 EHD4Q9H223 541 aa22■■□□□ 1.11
RAB28-202ENST00000330852 TTC6Q86TZ1 520 aa22■■□□□ 1.11
RAB28-202ENST00000330852 NKX2-3Q8TAU0 364 aa22■■□□□ 1.11
RAB28-202ENST00000330852 TMOD4Q9NZQ9 345 aa22■■□□□ 1.11
RAB28-202ENST00000330852 SAP30BPQ9UHR5 308 aaKnown RBP22■■□□□ 1.11
RAB28-202ENST00000330852 NDUFB9Q9Y6M9 179 aa22■■□□□ 1.11
RAB28-202ENST00000330852 ECM2O94769 699 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms