RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 GAS2L1Q99501 681 aaPredicted RBP18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 ZNF576Q9H609 170 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 MORF4L1Q9UBU8 362 aa18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 LRRFIP2Q9Y608 721 aaKnown RBP18.72■□□□□ 0.59
CTHRC1-201ENST00000330295 RLFQ13129 1914 aa18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 CTNND1O60716 968 aaKnown RBP18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 PABPC4Q13310 644 aaKnown RBP eCLIP18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 CCL14Q16627 93 aa18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 CCDC84Q86UT8 332 aaPredicted RBP18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 DAGLAQ9Y4D2 1042 aa18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 TCF20Q9UGU0 1960 aaKnown RBP18.71■□□□□ 0.59
CTHRC1-201ENST00000330295 DNM1LO00429 736 aa18.7■□□□□ 0.58
CTHRC1-201ENST00000330295 GNAI1P63096 354 aa18.7■□□□□ 0.58
CTHRC1-201ENST00000330295 MYO9BQ13459 2157 aa18.7■□□□□ 0.58
CTHRC1-201ENST00000330295 G2E3Q7L622 706 aa18.7■□□□□ 0.58
CTHRC1-201ENST00000330295 LINS1Q8NG48 757 aa18.7■□□□□ 0.58
CTHRC1-201ENST00000330295 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
CTHRC1-201ENST00000330295 CAVIN4Q5BKX8 364 aa18.69■□□□□ 0.58
CTHRC1-201ENST00000330295 USP6NLQ92738 828 aa18.69■□□□□ 0.58
CTHRC1-201ENST00000330295 RGS2P41220 211 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 EPHA10Q5JZY3 1008 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 LPAR1Q92633 364 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 TIFAQ96CG3 184 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 PDLIM7Q9NR12 457 aa18.68■□□□□ 0.58
CTHRC1-201ENST00000330295 RALBP1Q15311 655 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 DIXDC1Q155Q3 683 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 TMEM31Q5JXX7 168 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 APBA2Q99767 749 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 PUS3Q9BZE2 481 aaKnown RBP18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 DDX20Q9UHI6 824 aaKnown RBP18.67■□□□□ 0.58
CTHRC1-201ENST00000330295 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 TRIM43BA6NCK2 446 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 MSCO60682 206 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 HMGCS2P54868 508 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 SPP2Q13103 211 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 SH3RF1Q7Z6J0 888 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 TRIM43Q96BQ3 446 aaPredicted RBP18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 EPHX3Q9H6B9 360 aa18.66■□□□□ 0.58
CTHRC1-201ENST00000330295 MAPK4P31152 587 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 EPHB4P54760 987 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 SNX17Q15036 470 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 CCDC85BQ15834 202 aaPredicted RBP18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 TRIM60Q495X7 471 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 MORN1Q5T089 497 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 SH3BP5LQ7L8J4 393 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 GPRC5AQ8NFJ5 357 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 MROH5Q6ZUA9 1318 aa18.65■□□□□ 0.58
CTHRC1-201ENST00000330295 PEX10O60683 326 aa18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 BMP1P13497 986 aa18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 RGS3P49796 1198 aa18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 ZSCAN29Q8IWY8 852 aaPredicted RBP18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 ZNF280CQ8ND82 737 aa18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 PRDM12Q9H4Q4 367 aa18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 TXNRD2Q9NNW7 524 aa18.64■□□□□ 0.57
CTHRC1-201ENST00000330295 MYH13Q9UKX3 1938 aa18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 ENTPD3O75355 529 aa18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 IRX3P78415 501 aaPredicted RBP18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 FLIIQ13045 1269 aa18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 MFSD14CQ5VZR4 134 aa18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 GPR142Q7Z601 462 aa18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 CXXC1Q9P0U4 656 aaPredicted RBP18.63■□□□□ 0.57
CTHRC1-201ENST00000330295 ITGB8P26012 769 aa18.62■□□□□ 0.57
CTHRC1-201ENST00000330295 CNGA1P29973 690 aa18.62■□□□□ 0.57
CTHRC1-201ENST00000330295 GJC2Q5T442 439 aaPredicted RBP18.62■□□□□ 0.57
CTHRC1-201ENST00000330295 WDR66Q8TBY9 1149 aa18.62■□□□□ 0.57
CTHRC1-201ENST00000330295 IDI2Q9BXS1 227 aa18.62■□□□□ 0.57
CTHRC1-201ENST00000330295 UTYO14607 1347 aa18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 DDTLA6NHG4 134 aaPredicted RBP18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 FKBP5Q13451 457 aaPredicted RBP18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 ADGRE1Q14246 886 aa18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 SH3D19Q5HYK7 790 aa18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 PLEKHH3Q7Z736 793 aa18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 CCAR1Q8IX12 1150 aaKnown RBP18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 P2RX7Q99572 595 aaKnown RBP18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 TBC1D2Q9BYX2 928 aa18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 PORCNQ9H237 461 aa18.61■□□□□ 0.57
CTHRC1-201ENST00000330295 RFX7Q2KHR2 1363 aa18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 KBTBD13C9JR72 458 aa18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 MRE11P49959 708 aa18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 MAP2K5Q13163 448 aa18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 ARRDC4Q8NCT1 418 aa18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 TSPYL2Q9H2G4 693 aaPredicted RBP18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 FLRT1Q9NZU1 646 aa18.6■□□□□ 0.57
CTHRC1-201ENST00000330295 PLXNA1Q9UIW2 1896 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 GPR37L1O60883 481 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 IGFBP4P22692 258 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 PRDX5P30044 214 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 HERVK_113P62684 666 aa18.59■□□□□ 0.57
CTHRC1-201ENST00000330295 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms