RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 TLR7Q9NYK1 1049 aaKnown RBP16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 PI4KBQ9UBF8 816 aa16.61■□□□□ 0.25
GTF3C6-201ENST00000329970 BCRP11274 1271 aa16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 SH3RF3Q8TEJ3 882 aaPredicted RBP16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 CCDC8Q9H0W5 538 aaPredicted RBP16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
GTF3C6-201ENST00000329970 MKI67P46013 3256 aaKnown RBP16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 DOCK3Q8IZD9 2030 aa16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 ARHGAP39Q9C0H5 1083 aa16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
GTF3C6-201ENST00000329970 HMMRO75330 724 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 HOXD10P28358 340 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 CAP2P40123 477 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 SLC9C1Q4G0N8 1177 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 CPA4Q9UI42 421 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 AGTPBP1Q9UPW5 1226 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 FLT1P17948 1338 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 MYH7P12883 1935 aa16.58■□□□□ 0.24
GTF3C6-201ENST00000329970 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
GTF3C6-201ENST00000329970 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
GTF3C6-201ENST00000329970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.57■□□□□ 0.24
GTF3C6-201ENST00000329970 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
GTF3C6-201ENST00000329970 SRRDQ9UH36 339 aa16.57■□□□□ 0.24
GTF3C6-201ENST00000329970 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
GTF3C6-201ENST00000329970 NAV1Q8NEY1 1877 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 FAM196BA6NMK8 535 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 CTGFP29279 349 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 PSMC4P43686 418 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 PRPF38BQ5VTL8 546 aaKnown RBP16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 AACSQ86V21 672 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 ZNF280CQ8ND82 737 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 TRIM47Q96LD4 638 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
GTF3C6-201ENST00000329970 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 USP17L5A8MUK1 530 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 ASNSP08243 561 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 CYP2C8P10632 490 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 CYP7A1P22680 504 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 MAP3K12Q12852 859 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 PDE3AQ14432 1141 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 GADL1Q6ZQY3 521 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 AS3MTQ9HBK9 375 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
GTF3C6-201ENST00000329970 IDH1O75874 414 aaKnown RBP16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 OSBPP22059 807 aa16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 FCGRTP55899 365 aa16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 RRP1BQ14684 758 aaKnown RBP16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 DNAJC18Q9H819 358 aa16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
GTF3C6-201ENST00000329970 HLA-DOAP06340 250 aa16.53■□□□□ 0.24
GTF3C6-201ENST00000329970 SPP2Q13103 211 aa16.53■□□□□ 0.24
GTF3C6-201ENST00000329970 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.246e-8■□□□□ 9.5
GTF3C6-201ENST00000329970 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
GTF3C6-201ENST00000329970 ANTXR1Q9H6X2 564 aa16.53■□□□□ 0.24
GTF3C6-201ENST00000329970 IL1RAPL2Q9NP60 686 aa16.53■□□□□ 0.24
GTF3C6-201ENST00000329970 MYH8P13535 1937 aa16.53■□□□□ 0.24
GTF3C6-201ENST00000329970 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 FMNL1O95466 1100 aaPredicted RBP16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 DYNLL1P63167 89 aaKnown RBP16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 FAM110CQ1W6H9 321 aa16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 CCDC84Q86UT8 332 aaPredicted RBP16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 EHD4Q9H223 541 aa16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
GTF3C6-201ENST00000329970 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 GRK4P32298 578 aa16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 GCLCP48506 637 aaPredicted RBP16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 TREML2Q5T2D2 321 aa16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 RAET1EQ8TD07 263 aa16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 SH3TC2Q8TF17 1288 aa16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
GTF3C6-201ENST00000329970 EN2P19622 333 aaPredicted RBP16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 HMGCS2P54868 508 aa16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 BACE1P56817 501 aa16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 IRF5Q13568 498 aa16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
GTF3C6-201ENST00000329970 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms