RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SLC4A8Q2Y0W8 1093 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 CCDC144CPQ8IYA2 1237 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 TMEM87AQ8NBN3 555 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 DBNDD1Q9H9R9 158 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 FAM217BQ9NTX9 383 aaPredicted RBP23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 TMEM63CQ9P1W3 806 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 GAKO14976 1311 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 MBD3O95983 291 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 SEC23AQ15436 765 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 C12orf60Q5U649 245 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 TMTC2Q8N394 836 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 RBSNQ9H1K0 784 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 ORC3Q9UBD5 711 aaPredicted RBP23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 SUGT1Q9Y2Z0 365 aa23.68■■□□□ 1.38
RIPPLY3-201ENST00000329553 ORC4O43929 436 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 GADD45BO75293 160 aaPredicted RBP23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 CERS3Q8IU89 383 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 KCNQ5Q9NR82 932 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 LAMB1P07942 1786 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 TNKSO95271 1327 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 GOLGA8AA7E2F4 631 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 F8W031 263 aaPredicted RBP23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 SLC3A2P08195 630 aaKnown RBP23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 RHBDL3P58872 404 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 PODNQ7Z5L7 613 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 MAPKAPK5Q8IW41 473 aa23.67■■□□□ 1.38
RIPPLY3-201ENST00000329553 RESTQ13127 1097 aa23.66■■□□□ 1.38
RIPPLY3-201ENST00000329553 SYNE3Q6ZMZ3 975 aa23.66■■□□□ 1.38
RIPPLY3-201ENST00000329553 ZSCAN10Q96SZ4 725 aaPredicted RBP23.66■■□□□ 1.38
RIPPLY3-201ENST00000329553 FIBPO43427 364 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 LRSAM1Q6UWE0 723 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 TEX11Q8IYF3 940 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 DAGLAQ9Y4D2 1042 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 PLCG2P16885 1265 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 PDE4BQ07343 736 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 NTRK3Q16288 839 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 CCDC125Q86Z20 511 aa23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 ENAHQ8N8S7 591 aaPredicted RBP23.65■■□□□ 1.38
RIPPLY3-201ENST00000329553 GUCY1B3Q02153 619 aa23.64■■□□□ 1.38
RIPPLY3-201ENST00000329553 TTF2Q9UNY4 1162 aaKnown RBP23.64■■□□□ 1.38
RIPPLY3-201ENST00000329553 C21orf2O43822 256 aa23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 IQCA1Q86XH1 822 aa23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 DYNLL2Q96FJ2 89 aa23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 ZSCAN16Q9H4T2 348 aaPredicted RBP23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 SAP30BPQ9UHR5 308 aaKnown RBP23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 CDK5RAP2Q96SN8 1893 aa23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 SNED1Q8TER0 1413 aa23.64■■□□□ 1.37
RIPPLY3-201ENST00000329553 FAM47AQ5JRC9 791 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 CC2D2BQ6DHV5 1058 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 CDKL5O76039 1030 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 PLCD1P51178 756 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 KRT85P78386 507 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 CPLX2Q6PUV4 134 aaKnown RBP23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 ZNF654Q8IZM8 581 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 PHKBQ93100 1093 aa23.63■■□□□ 1.37
RIPPLY3-201ENST00000329553 OTUD7BQ6GQQ9 843 aa23.62■■□□□ 1.37
RIPPLY3-201ENST00000329553 PDLIM2Q96JY6 352 aa23.62■■□□□ 1.37
RIPPLY3-201ENST00000329553 TFIP11Q9UBB9 837 aaKnown RBP23.62■■□□□ 1.37
RIPPLY3-201ENST00000329553 NID2Q14112 1375 aa23.62■■□□□ 1.37
RIPPLY3-201ENST00000329553 ECE2O60344 883 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 POLR3DP05423 398 aaPredicted RBP23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 KCNA3P22001 575 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 AMOTL1Q8IY63 956 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 TTLL6Q8N841 843 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 C8orf76Q96K31 380 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 NAV1Q8NEY1 1877 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 NMT2O60551 498 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 SCNN1DP51172 638 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 AOC3Q16853 763 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 IFIT1BQ5T764 474 aaKnown RBP23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 NUP133Q8WUM0 1156 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 GJB4Q9NTQ9 266 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 FLT1P17948 1338 aa23.61■■□□□ 1.37
RIPPLY3-201ENST00000329553 SYCE3A1L190 88 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 DPEP1P16444 411 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 RTN1Q16799 776 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 HS1BP3Q53T59 392 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 ZSCAN30Q86W11 494 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 FANCBQ8NB91 859 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 FBXO18Q8NFZ0 1043 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 ROBO3Q96MS0 1386 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 TSPY2A6NKD2 308 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 IARSP41252 1262 aaKnown RBP23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 RCAN1P53805 252 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 CSPP1Q1MSJ5 1256 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 AIFM3Q96NN9 605 aa23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 GOLGB1Q14789 3259 aaKnown RBP23.6■■□□□ 1.37
RIPPLY3-201ENST00000329553 ZBTB7AO95365 584 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 KIAA2012Q0VF49 1180 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 STRIP1Q5VSL9 837 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 TTC6Q86TZ1 520 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 NAP1L5Q96NT1 182 aaPredicted RBP23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 SCN9AQ15858 1988 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 IFNAR1P17181 557 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 UBE2HP62256 183 aa23.59■■□□□ 1.37
RIPPLY3-201ENST00000329553 DLEC1Q9Y238 1755 aa23.58■■□□□ 1.37
RIPPLY3-201ENST00000329553 DACT2Q5SW24 774 aa23.58■■□□□ 1.37
RIPPLY3-201ENST00000329553 SLC44A5Q8NCS7 719 aa23.58■■□□□ 1.37
RIPPLY3-201ENST00000329553 MKNK2Q9HBH9 465 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms