RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
VIPAS39-201ENST00000327028 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
VIPAS39-201ENST00000327028 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
VIPAS39-201ENST00000327028 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
VIPAS39-201ENST00000327028 B4E1Z4 1266 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 HLA-DOAP06340 250 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 AK2P54819 239 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 C16orf86Q6ZW13 317 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 EHD4Q9H223 541 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 MYH8P13535 1937 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 PRC1O43663 620 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 EPS15P42566 896 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 ANTXR2P58335 489 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 TCP10Q12799 353 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 ANKRD1Q15327 319 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 STK11IPQ8N1F8 1099 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 TRPM4Q8TD43 1214 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 FAM151AQ8WW52 585 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 ESR2Q92731 530 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 VEZTQ9HBM0 779 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 WDR90Q96KV7 1748 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 SCN4AP35499 1836 aa12.1□□□□□ -0.47
VIPAS39-201ENST00000327028 TCP10L2B9ZVM9 353 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 K7ELQ4 463 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 KDM4AO75164 1064 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 SH3BP5LQ7L8J4 393 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 TCEANC2Q96MN5 208 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 ADARB2Q9NS39 739 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 GLTPD2A6NH11 291 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 GABPAQ06546 454 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 AGXT2Q9BYV1 514 aa12.09□□□□□ -0.47
VIPAS39-201ENST00000327028 DDTLA6NHG4 134 aaPredicted RBP12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 TNNI2P48788 182 aa12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 TNFAIP1Q13829 316 aa12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 Q6ZUG5 572 aa12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 MTA3Q9BTC8 594 aa12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 SWAP70Q9UH65 585 aa12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 SERPINB13Q9UIV8 391 aa12.08□□□□□ -0.47
VIPAS39-201ENST00000327028 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 PRDM1O75626 825 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 CDK8P49336 464 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 ZSCAN29Q8IWY8 852 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 SLC44A5Q8NCS7 719 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 TMEM87BQ96K49 555 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 HACL1Q9UJ83 578 aa12.08□□□□□ -0.48
VIPAS39-201ENST00000327028 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 MKNK2Q9HBH9 465 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 ASTN2O75129 1339 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 SH2B2O14492 632 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 RANBP6O60518 1105 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 RASA1P20936 1047 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 FGD1P98174 961 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 LIMCH1Q9UPQ0 1083 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 HIRAP54198 1017 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 SART3Q15020 963 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 NOL8Q76FK4 1167 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 BRF1Q92994 677 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 TMX3Q96JJ7 454 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 CSRNP1Q96S65 589 aa12.07□□□□□ -0.48
VIPAS39-201ENST00000327028 GREB1LQ9C091 1923 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 PLIN4Q96Q06 1357 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 CRACR2BQ8N4Y2 399 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 ZSCAN31Q96LW9 406 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 TMEM39BQ9GZU3 492 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 GGA3Q9NZ52 723 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 ANGEL1Q9UNK9 670 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 UTRNP46939 3433 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 TSPY2A6NKD2 308 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 SHMT1P34896 483 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 RASA3Q14644 834 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 TMEM67Q5HYA8 995 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 IGDCC4Q8TDY8 1250 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 TRIM34Q9BYJ4 488 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 DNAJC18Q9H819 358 aa12.06□□□□□ -0.48
VIPAS39-201ENST00000327028 IQCA1LA6NCM1 817 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms