RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 JRKLQ9Y4A0 524 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 HACE1Q8IYU2 909 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 UBLCP1Q8WVY7 318 aaPredicted RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 BICD1Q96G01 975 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 ZNF830Q96NB3 372 aaPredicted RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 HSPA6P17066 643 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 BLVRAP53004 296 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 EXOC8Q8IYI6 725 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 TRIM58Q8NG06 486 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 GUCA1BQ9UMX6 200 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 EPB41P11171 864 aaKnown RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 SYT10Q6XYQ8 523 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 RAB11FIP4Q86YS3 637 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 RNF10Q8N5U6 811 aaKnown RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 IPO5O00410 1097 aaKnown RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 ATP2C2O75185 946 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 CCDC125Q86Z20 511 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 SRRM1Q8IYB3 904 aaKnown RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 TSC1Q92574 1164 aa7.04□□□□□ -1.28
SSH1-202ENST00000326495 MRPL40Q9NQ50 206 aaKnown RBP7.04□□□□□ -1.28
SSH1-202ENST00000326495 TSPY3P0CV98 308 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 TSPY8P0CW00 308 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 VPS52Q8N1B4 723 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 MCUR1Q96AQ8 359 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CCDC88CQ9P219 2028 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 IGHDP01880 384 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 DENND2CQ68D51 928 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 COL17A1Q9UMD9 1497 aaPredicted RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 SH3BP5O60239 455 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CFAP221Q4G0U5 840 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CEP120Q8N960 986 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 IGSF22Q8N9C0 903 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 RETREG2Q8NC44 543 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 SYNRGQ9UMZ2 1314 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 GRK7Q8WTQ7 553 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 SPDYE3A6NKU9 549 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 KDM3AQ9Y4C1 1321 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CEP85LQ5SZL2 805 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CCDC63Q8NA47 563 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 RPGRQ92834 1020 aaKnown RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 MYCBPQ99417 103 aaPredicted RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 FAM96AQ9H5X1 160 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 ICE1Q9Y2F5 2266 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 GFAPP14136 432 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 ASPHQ12797 758 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CCDC170Q8IYT3 715 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 GTF3C6Q969F1 213 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 SPC25Q9HBM1 224 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 ZC4H2Q9NQZ6 224 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 SAMM50Q9Y512 469 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 PSMC4P43686 418 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 NBPF9Q3BBW0 867 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 NT5C3AQ9H0P0 336 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 DISP3Q9P2K9 1392 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 PHLPP2Q6ZVD8 1323 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 GRM8O00222 908 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CADPS2Q86UW7 1296 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CCDC8Q9H0W5 538 aaPredicted RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 PUF60Q9UHX1 559 aaKnown RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 RP1P56715 2156 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 ZNF500O60304 480 aaPredicted RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 AFMP43652 599 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 NAA16Q6N069 864 aaPredicted RBP7.03□□□□□ -1.28
SSH1-202ENST00000326495 LZTFL1Q9NQ48 299 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 ZRANB1Q9UGI0 708 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 CD109Q6YHK3 1445 aa7.03□□□□□ -1.28
SSH1-202ENST00000326495 DTHD1Q6ZMT9 781 aa7.02□□□□□ -1.28
SSH1-202ENST00000326495 CUEDC2Q9H467 287 aa7.02□□□□□ -1.28
SSH1-202ENST00000326495 DCTPP1Q9H773 170 aa7.02□□□□□ -1.28
SSH1-202ENST00000326495 SPINK5Q9NQ38 1064 aaPredicted RBP7.02□□□□□ -1.28
SSH1-202ENST00000326495 ANGPTL3Q9Y5C1 460 aa7.02□□□□□ -1.28
SSH1-202ENST00000326495 SYCP2Q9BX26 1530 aa7.02□□□□□ -1.28
SSH1-202ENST00000326495 SLC4A8Q2Y0W8 1093 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 KRT79Q5XKE5 535 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 EFHD1Q9BUP0 239 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 RHOXF2BP0C7M4 288 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 P4HA1P13674 534 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 ERCC5P28715 1186 aaPredicted RBP7.02□□□□□ -1.29
SSH1-202ENST00000326495 RHOXF2Q9BQY4 288 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 MYH1P12882 1939 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 MYH2Q9UKX2 1941 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 MYH4Q9Y623 1939 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 ARHGEF37A1IGU5 675 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 ZNF75DP51815 510 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 CREB3L3Q68CJ9 461 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 SLC9C1Q4G0N8 1177 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 RPUSD2Q8IZ73 545 aaKnown RBP7.02□□□□□ -1.29
SSH1-202ENST00000326495 WASLO00401 505 aaPredicted RBP7.02□□□□□ -1.29
SSH1-202ENST00000326495 USP26Q9BXU7 913 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 KCNK9Q9NPC2 374 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 NOS1P29475 1434 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 PAG1Q9NWQ8 432 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 URB2Q14146 1524 aaKnown RBP7.02□□□□□ -1.29
SSH1-202ENST00000326495 LAMC1P11047 1609 aa7.02□□□□□ -1.29
SSH1-202ENST00000326495 SNRPA1P09661 255 aaKnown RBP7.02□□□□□ -1.29
SSH1-202ENST00000326495 PDCD2Q16342 344 aaPredicted RBP7.02□□□□□ -1.29
SSH1-202ENST00000326495 IFT81Q8WYA0 676 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms